RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 RNF122Q9H9V4 155 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 WNT16Q9UBV4 365 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 CARHSP1Q9Y2V2 147 aaKnown RBP13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 NRXN2Q9P2S2 1712 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 TEX50A0A1B0GTY4 177 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 CXorf65A6NEN9 183 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 HELTA6NFD8 242 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 M0R2Z0 102 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 ETFRF1Q6IPR1 90 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 MOB3BQ86TA1 216 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 VN1R17PQ8TDU5 208 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 BLNKQ8WV28 456 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 ADIPOR1Q96A54 375 aa13.56□□□□□ -0.24
TRAPPC11-202ENST00000357207 MSGN1A6NI15 193 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 CCL4P13236 92 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 ZNF501Q96CX3 271 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 SIPA1L1O43166 1804 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 H0Y980 276 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 OR5AL1P0C617 328 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 FHITP49789 147 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 PSG4Q00888 419 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 LRRC10Q5BKY1 277 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 ZNF385CQ66K41 422 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 TMEM191AQ9H0A3 160 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 CLN8Q9UBY8 286 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 DHRS7CA6NNS2 312 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 SCTP09683 121 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 EIF4E3Q8N5X7 224 aaKnown RBP13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 MISP3Q96FF7 219 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 RNF2Q99496 336 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 AAMDCQ9H7C9 122 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 TMEM229AB2RXF0 380 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 RPLP1P05386 114 aaKnown RBP13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 HFEQ30201 348 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 LINC00596Q86U02 117 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 RARRES2Q99969 163 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 ARRDC1-AS1Q9H2J1 176 aa13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 GSX1Q9H4S2 264 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 METTL1Q9UBP6 276 aaKnown RBP13.55□□□□□ -0.24
TRAPPC11-202ENST00000357207 A0A1W2PN81 502 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 BMPR1BO00238 502 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 CXorf1O96002 111 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 RBP4P02753 201 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 DDTP30046 118 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 SLC22A18ASQ8N1D0 253 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 ZNF488Q96MN9 340 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 hADV38S2A0JD32 116 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 ACTL6AO96019 429 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 CTSBP07858 339 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 SP1P08047 785 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 FGF12P61328 243 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 DEFB109BQ30KR1 87 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 OR52M1Q8NGK5 317 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 TCFL5Q9UL49 500 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 SCN10AQ9Y5Y9 1956 aa13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 TBX6O95947 436 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC11-202ENST00000357207 A0A1B0GTQ1 180 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 RNF222A6NCQ9 220 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 DNASE2O00115 360 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 ORM2P19652 201 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 SLC23A3Q6PIS1 610 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 OR4F17Q8NGA8 305 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 TRBV23-1A0A0A0MS06 115 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 GCGP01275 180 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 NPY1RP25929 384 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 COTL1Q14019 142 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 PCGF1Q9BSM1 259 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 SH3BGRL3Q9H299 93 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 ZNF552Q9H707 407 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 DMRT1Q9Y5R6 373 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 ZNF831Q5JPB2 1677 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 ZDBF2Q9HCK1 2354 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 TGIF2-C20orf24A0A0A6YYL0 155 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 SRSF10O75494 262 aaKnown RBP13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 SPNS3Q6ZMD2 512 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 P2RX4Q99571 388 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 ESPL1Q14674 2120 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 CACNA1EQ15878 2313 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 IGLV3-21P80748 117 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 OR1P1Q8NH06 330 aa13.53□□□□□ -0.24
TRAPPC11-202ENST00000357207 TET1Q8NFU7 2136 aa13.52□□□□□ -0.24
TRAPPC11-202ENST00000357207 TEPPQ6URK8 271 aa13.52□□□□□ -0.24
TRAPPC11-202ENST00000357207 Q96M66 194 aa13.52□□□□□ -0.24
TRAPPC11-202ENST00000357207 AICDAQ9GZX7 198 aa13.52□□□□□ -0.24
TRAPPC11-202ENST00000357207 GAL3ST2Q9H3Q3 398 aa13.52□□□□□ -0.24
TRAPPC11-202ENST00000357207 NPIPB9F8W1W9 429 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 CSN3P07498 182 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 MELTFP08582 738 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 CD1BP29016 333 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 KLF3P57682 345 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 UNC119Q13432 240 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 PDPNQ86YL7 162 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 VSTM2AQ8TAG5 236 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 TAF15Q92804 592 aaKnown RBP eCLIP13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 AKAP6Q13023 2319 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 DICER1Q9UPY3 1922 aaKnown RBP13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 NAT2P11245 290 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms