RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 CMTM2Q8TAZ6 248 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 MANBALQ9NQG1 85 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 NXPH3O95157 252 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 NDUFB8O95169 186 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 RSPO1Q2MKA7 263 aaPredicted RBP12.55□□□□□ -0.4
TOP3B-201ENST00000357179 TMEM41BQ5BJD5 291 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 ZNF295-AS1Q8N0V1 137 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 CADM4Q8NFZ8 388 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 ORAOV1Q8WV07 137 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 WDYHV1Q96HA8 205 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 ADAMTS20P59510 1910 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 PAFAH1B2P68402 229 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 FAM69BQ5VUD6 431 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 CALHM1Q8IU99 346 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 C20orf196Q8IYI0 205 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 NABP1Q96AH0 204 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 TAAR3PQ9P1P4 343 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 M0R135 149 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 TNFSF12O43508 249 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 GYPAP02724 150 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 UCP1P25874 307 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 PTTG1IPP53801 180 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 ASCL4Q6XD76 172 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 TMEM144Q7Z5S9 345 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 MRPL30Q8TCC3 161 aaKnown RBP12.55□□□□□ -0.4
TOP3B-201ENST00000357179 NAT6Q93015 286 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 ZNF799Q96GE5 643 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 TMEM9BQ9NQ34 198 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
TOP3B-201ENST00000357179 H3BP45 60 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 ANGPTL7O43827 346 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 TMEM267Q0VDI3 215 aaPredicted RBP12.54□□□□□ -0.4
TOP3B-201ENST00000357179 Q6ZPA2 131 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 SPTSSAQ969W0 71 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 PINX1Q96BK5 328 aaKnown RBP12.54□□□□□ -0.4
TOP3B-201ENST00000357179 BTF3L4Q96K17 158 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 RTTNQ86VV8 2226 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 DKK1O94907 266 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 VENTXO95231 258 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 LTBRP36941 435 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 TPPP2P59282 170 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 BRICD5Q6PL45 260 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 LHX4Q969G2 390 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 CIB3Q96Q77 187 aaPredicted RBP12.54□□□□□ -0.4
TOP3B-201ENST00000357179 SPAG17Q6Q759 2223 aa12.54□□□□□ -0.4
TOP3B-201ENST00000357179 NCOA6Q14686 2063 aaPredicted RBP12.53□□□□□ -0.4
TOP3B-201ENST00000357179 OR2J2O76002 312 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 PDGFBP01127 241 aaPredicted RBP12.53□□□□□ -0.4
TOP3B-201ENST00000357179 RAC1P63000 192 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 RNPS1Q15287 305 aaKnown RBP12.53□□□□□ -0.4
TOP3B-201ENST00000357179 SHBQ15464 509 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 OR8B8Q15620 311 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 RAB30Q15771 203 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 SMRP1Q8NCR6 262 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 SPACA9Q96E40 222 aaPredicted RBP12.53□□□□□ -0.4
TOP3B-201ENST00000357179 TECTBQ96PL2 329 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 GSX1Q9H4S2 264 aaPredicted RBP12.53□□□□□ -0.4
TOP3B-201ENST00000357179 REV3LO60673 3130 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 A0A0U1RQK1 487 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 ZNF320A2RRD8 509 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 C2CD4DB7Z1M9 353 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 VAMP5O95183 116 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 ESDP10768 282 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 CDKN1AP38936 164 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 CNN3Q15417 329 aaKnown RBP12.53□□□□□ -0.4
TOP3B-201ENST00000357179 MMDQ15546 238 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 RIPPLY2Q5TAB7 128 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 FAM78BQ5VT40 261 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 ZNF525Q8N782 197 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 STPG4Q8N801 248 aa12.53□□□□□ -0.4
TOP3B-201ENST00000357179 DHHO43323 396 aa12.52□□□□□ -0.4
TOP3B-201ENST00000357179 CEACAM8P31997 349 aaPredicted RBP12.52□□□□□ -0.4
TOP3B-201ENST00000357179 PSMB3P49720 205 aa12.52□□□□□ -0.4
TOP3B-201ENST00000357179 COMPP49747 757 aaPredicted RBP12.52□□□□□ -0.4
TOP3B-201ENST00000357179 LRRC75BQ2VPJ9 315 aa12.52□□□□□ -0.4
TOP3B-201ENST00000357179 PHYHD1Q5SRE7 291 aa12.52□□□□□ -0.4
TOP3B-201ENST00000357179 VN1R17PQ8TDU5 208 aa12.52□□□□□ -0.4
TOP3B-201ENST00000357179 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.4
TOP3B-201ENST00000357179 TRAV39A0A0B4J263 110 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-201ENST00000357179 SPRY1O43609 319 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-201ENST00000357179 SPIN3Q5JUX0 258 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 ALKBH3Q96Q83 286 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-201ENST00000357179 RAB40CQ96S21 281 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 SLC7A10Q9NS82 523 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 SLC39A9Q9NUM3 307 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 PLA2G3Q9NZ20 509 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 RALGAPA1Q6GYQ0 2036 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 SYNGR4O95473 234 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 CNOT4O95628 575 aaKnown RBP12.52□□□□□ -0.41
TOP3B-201ENST00000357179 LINC00310P59036 64 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 PPP1CBP62140 327 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 WDR5BQ86VZ2 330 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 HSPB9Q9BQS6 159 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 PPIAL4AQ9Y536 164 aa12.52□□□□□ -0.41
TOP3B-201ENST00000357179 OR6C6A6NF89 314 aa12.51□□□□□ -0.41
TOP3B-201ENST00000357179 KIAA1324LA8MWY0 1029 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-201ENST00000357179 ETFRF1Q6IPR1 90 aa12.51□□□□□ -0.41
TOP3B-201ENST00000357179 ZNF818PQ6ZRF7 136 aa12.51□□□□□ -0.41
TOP3B-201ENST00000357179 LHFPL2Q6ZUX7 228 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms