RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ZNF488Q96MN9 340 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 TRAV20A0A0B4J274 112 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 A0A1W2PQM1 296 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 PPIHO43447 177 aaKnown RBP14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 GYPAP02724 150 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 P2RY6Q15077 328 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 NPAS1Q99742 590 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 DDA1Q9BW61 102 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 MS4A5Q9H3V2 200 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 LOC102723971A0A1B0GUV8 181 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 ZNF785A8K8V0 405 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 AGFG2O95081 481 aa14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 MUC1P15941 1255 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 MRPL30Q8TCC3 161 aaKnown RBP14.81□□□□□ -0.04
TRAPPC11-201ENST00000334690 A0A0G2JK05 382 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 SLC31A2O15432 143 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 ERVS71-1P61550 626 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 B2MP61769 119 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 POM121Q96HA1 1249 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 RSRP1Q9BUV0 290 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 LOC285556D6RIA3 1793 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 PGA5P0DJD9 388 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 COX7A1P24310 79 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 Q56UQ5 140 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 MGST3O14880 152 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 SPINK4O60575 86 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 COX5BP10606 129 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 TGIF2LYQ8IUE0 185 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 TGIF2LXQ8IUE1 241 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 SSMEM1Q8WWF3 244 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 Q96M66 194 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 HES7Q9BYE0 225 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 PARD6AQ9NPB6 346 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 PAGE4O60829 102 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 ZNF273Q14593 569 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 DHRS7BQ6IAN0 325 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 SSX8Q7RTT4 187 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 CA5BP1Q8WTZ4 195 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 RAB1BQ9H0U4 201 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 DOK5Q9P104 306 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 TUBD1Q9UJT1 453 aa14.8□□□□□ -0.04
TRAPPC11-201ENST00000334690 ANKRD36A6QL64 1941 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 LOC390937A0A1W2PQ73 354 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 CRISP2P16562 243 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 ORM2P19652 201 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 PPP1CCP36873 323 aaKnown RBP14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 PCOLCEQ15113 449 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 PSG5Q15238 335 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 NHLRC3Q5JS37 347 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 C10orf128Q5T292 105 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 PKIBQ9C010 78 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 C5orf66Q9H5L9 145 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 IGKV3D-11A0A0A0MRZ8 115 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 UCP2P55851 309 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 FAM209AQ5JX71 171 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 SLC16A13Q7RTY0 426 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 OR4P4Q8NGL7 312 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 PILRBQ9UKJ0 227 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 HOXB1P14653 301 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 ANKRD55Q3KP44 614 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 SAXO1Q8IYX7 474 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 MARS2Q96GW9 593 aaKnown RBP14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 PRDM14Q9GZV8 571 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 LYRM2Q9NU23 88 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 CACNA1DQ01668 2161 aa14.79□□□□□ -0.04
TRAPPC11-201ENST00000334690 KCNAB3O43448 404 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 BCL2P10415 239 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 PRDX2P32119 198 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 CCKARP32238 428 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 TMEM255AQ5JRV8 349 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 NCMAPQ5T1S8 102 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 TEPPQ6URK8 271 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 LINC00114Q6XXX2 140 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 PDPNQ86YL7 162 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 PUSL1Q8N0Z8 303 aaKnown RBP14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 APCDD1LQ8NCL9 501 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 WIPI2Q9Y4P8 454 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 PATJQ8NI35 1801 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 MFSD2BA6NFX1 497 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 SCTP09683 121 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 HNRNPA3P51991 378 aaKnown RBP14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 UBE2V2Q15819 145 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 TMEM183BQ1AE95 376 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 NHLRC2Q8NBF2 726 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 STXBP6Q8NFX7 210 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 VWCEQ96DN2 955 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 LOXL4Q96JB6 756 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 HARBI1Q96MB7 349 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 NPTNQ9Y639 398 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 FAM90A27PA6NNH2 459 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 M0QZ24 198 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 AMTP48728 403 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 GUCA2BQ16661 112 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 C19orf35Q6ZS72 473 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 RGP1Q92546 391 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 FLYWCH2Q96CP2 140 aaKnown RBP14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 ABCA7Q8IZY2 2146 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 IGLV3-19P01714 112 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 COX6A1P12074 109 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 S100A4P26447 101 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms