RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 DGCR14Q96DF8 476 aaKnown RBP4.8□□□□□ -1.64
SSX3-201ENST00000298396 RAB3CQ96E17 227 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 FAHD2AQ96GK7 314 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 ZNF714Q96N38 554 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 SOSTQ9BQB4 213 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 PCGF1Q9BSM1 259 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 PARP12Q9H0J9 701 aaKnown RBP4.8□□□□□ -1.64
SSX3-201ENST00000298396 AUNIPQ9H7T9 357 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 ZMAT4Q9H898 229 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 Q9N2K0 584 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 CALYQ9NYX4 217 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 LPAR3Q9UBY5 353 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 ZNF230Q9UIE0 474 aaPredicted RBP4.8□□□□□ -1.64
SSX3-201ENST00000298396 KCNS2Q9ULS6 477 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 ANAPC10Q9UM13 185 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 UBE2J1Q9Y385 318 aaPredicted RBP4.8□□□□□ -1.64
SSX3-201ENST00000298396 AUP1Q9Y679 476 aa4.8□□□□□ -1.64
SSX3-201ENST00000298396 TET2Q6N021 2002 aaPredicted RBP4.8□□□□□ -1.64
SSX3-201ENST00000298396 ANK2Q01484 3957 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 TRGV10A0A0A0MS01 117 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 A0A0A6YYH2 397 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 IGHV3-43A0A0B4J1X8 118 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 TRAV40A0A0B4J280 105 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 KBTBD11-OT1A0A1B0GTJ5 212 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 A0A1W2PRD5 423 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 A0A1W2PRF3 423 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 A0A1W2PRM7 423 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 METTL21EPA6NDL7 271 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 A6NJ64 397 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 ZNF729A6NN14 1252 aaPredicted RBP4.79□□□□□ -1.64
SSX3-201ENST00000298396 SERPINE3A8MV23 424 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 F2RL2O00254 374 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 SLC31A2O15432 143 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 NOL3O60936 208 aaKnown RBP4.79□□□□□ -1.64
SSX3-201ENST00000298396 CA11O75493 328 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 HBZP02008 142 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 IGHV3-43DP0DP04 118 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 PAX6P26367 422 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 CD34P28906 385 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 MNDAP41218 407 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 RBM39Q14498 530 aaKnown RBP4.79□□□□□ -1.64
SSX3-201ENST00000298396 CNPY1Q3B7I2 92 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 HACD4Q5VWC8 232 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 CNIH2Q6PI25 160 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 BTNL3Q6UXE8 466 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 HEPN1Q6WQI6 88 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 BRD3OSQ6XYD6 125 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 LDLRAD3Q86YD5 345 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 DYNAPQ8N1N2 210 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 GVQW1Q8N7I0 195 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 ZNF439Q8NDP4 499 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 MCFD2Q8NI22 146 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 NEK7Q8TDX7 302 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 SNAPC3Q92966 411 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 LEAP2Q969E1 77 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 LHX4Q969G2 390 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 CMTM3Q96MX0 182 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 ZNF48Q96MX3 618 aaPredicted RBP4.79□□□□□ -1.64
SSX3-201ENST00000298396 SUCNR1Q9BXA5 334 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 ZNF286AQ9HBT8 521 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 TAS2R3Q9NYW6 316 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 IDI2-AS1Q9NZ38 188 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 OR6C3Q9NZP0 311 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 NDUFA13Q9P0J0 144 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 ZNF69Q9UC07 566 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 SESN1Q9Y6P5 492 aa4.79□□□□□ -1.64
SSX3-201ENST00000298396 A0A087X0M5 115 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 IGHV2-26A0A0B4J1V2 119 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 IGHV1-69DA0A0B4J2H0 117 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 MDFIC2A0A1B0GVS7 189 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 A0A1B0GX30 115 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 A0A1W2PPE3 182 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 FUOMA2VDF0 154 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 MEIS3P1A6NDR6 274 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 DBX1A6NMT0 343 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 NPIPB6E9PJ23 425 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 ORC5O43913 435 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 IGHV1-69P01742 117 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 IGHV3-7P01780 117 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 SCTP09683 121 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 CD3GP09693 182 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 GSTT2P0CG29 244 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 GSTT2BP0CG30 244 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 DTYMKP23919 212 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 COX7A1P24310 79 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 TNFSF8P32971 234 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 SOX6P35712 828 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 RANBP1P43487 201 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 ZNF134P52741 427 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 HLA-DRB3P79483 266 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 DGCR2P98153 550 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 LTC4SQ16873 150 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 PNLIPRP3Q17RR3 467 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 FBLN7Q53RD9 439 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 IGSF11Q5DX21 431 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 TMEM69Q5SWH9 247 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 ZNF626Q68DY1 528 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 MZT2AQ6P582 158 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 Q6ZS49 121 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 LHFPL4Q7Z7J7 247 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms