RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 LINC01565O15544 149 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 CRISP2P16562 243 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 IGFBP7Q16270 282 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 TRIM61Q5EBN2 209 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 CADM4Q8NFZ8 388 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 GPR146Q96CH1 333 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 C18orf12Q96KH6 178 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 BLACEA4D250 179 aa13.71□□□□□ -0.22
PRPF40B-201ENST00000261897 MGST1P10620 155 aaKnown RBP13.71□□□□□ -0.22
PRPF40B-201ENST00000261897 IER3P46695 156 aa13.71□□□□□ -0.22
PRPF40B-201ENST00000261897 RHBDD1Q8TEB9 315 aa13.71□□□□□ -0.22
PRPF40B-201ENST00000261897 MOB3AQ96BX8 217 aa13.71□□□□□ -0.22
PRPF40B-201ENST00000261897 OXGR1Q96P68 337 aa13.71□□□□□ -0.22
PRPF40B-201ENST00000261897 TRAPPC2LH3BP13 241 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 DTX1Q86Y01 620 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 CARFQ8N187 725 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 OR4C5Q8NGB2 326 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 OR2J1Q9GZK6 312 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 TRAPPC2LQ9UL33 140 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 BCAT2O15382 392 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 IGHV3-13P01766 116 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 IGHV3-7P01780 117 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 ZNF32P17041 273 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 CCKARP32238 428 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 TPPP2P59282 170 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 MKXQ8IYA7 352 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 CLN8Q9UBY8 286 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 CLPSP04118 112 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 CFPP27918 469 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 OR4D5Q8NGN0 318 aa13.7□□□□□ -0.22
PRPF40B-201ENST00000261897 SPTY2D1-AS1A0A0U1RR47 76 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 MKRN2OSH3BPM6 223 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 TNFSF11O14788 317 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 TRAF3IP2O43734 574 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 EFNA2O43921 213 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 FBXO46Q6PJ61 603 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 Q6ZS52 159 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 YRDCQ86U90 279 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 LYPD6Q86Y78 171 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 VWCEQ96DN2 955 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 TOX2Q96NM4 488 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 IL23AQ9NPF7 189 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 KIAA1549LQ6ZVL6 1849 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 F6UZH7 168 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 IGKV3-11P04433 115 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 C1QTNF9P0C862 333 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 YPEL5P62699 121 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 MRPL21Q7Z2W9 205 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 FAM89BQ8N5H3 189 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 OR2V1Q8NHB1 315 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 CTDSP1Q9GZU7 261 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 B3GAT1Q9P2W7 334 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 A0A0G2JRQ6 117 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 DUXBA0A1W2PPF3 345 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 SLC17A3O00476 420 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 NUPR1O60356 82 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 STARD4Q96DR4 205 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 DERL1Q9BUN8 251 aa13.69□□□□□ -0.22
PRPF40B-201ENST00000261897 NCOR1O75376 2440 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 TRAV38-1A0A0B4J264 116 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 SLC25A6P12236 298 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 BCL3P20749 454 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 OR5AU1Q8NGC0 362 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 CISD1Q9NZ45 108 aaKnown RBP13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 TRBV24-1A0A075B6N3 115 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 IGKV1-12A0A0C4DH73 117 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 CEACAM18A8MTB9 384 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 IGKV1D-12P01611 117 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 ZNF439Q8NDP4 499 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 LPAR2Q9HBW0 351 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 PTRH2Q9Y3E5 179 aaKnown RBP13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 IGKV1-27A0A075B6S5 117 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 LMO1P25800 156 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 IL3RAP26951 378 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 CD38P28907 300 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 PHYHD1Q5SRE7 291 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 COL5A1-AS1Q5SY13 56 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 SPATA46Q5T0L3 261 aa13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 NEIL1Q96FI4 390 aaPredicted RBP13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 ACTR3CQ9C0K3 210 aaPredicted RBP13.68□□□□□ -0.22
PRPF40B-201ENST00000261897 CDKN1AP38936 164 aa13.67□□□□□ -0.22
PRPF40B-201ENST00000261897 ZNF586Q9NXT0 402 aa13.67□□□□□ -0.22
PRPF40B-201ENST00000261897 NAT8BQ9UHF3 227 aa13.67□□□□□ -0.22
PRPF40B-201ENST00000261897 PRR14LQ5THK1 2151 aa13.67□□□□□ -0.22
PRPF40B-201ENST00000261897 TSTD1Q8NFU3 115 aa13.67□□□□□ -0.22
PRPF40B-201ENST00000261897 PRRG4Q9BZD6 226 aa13.67□□□□□ -0.22
PRPF40B-201ENST00000261897 DIRC3C9JPN6 131 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 IL18BPO95998 194 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 OR5G3P0C626 314 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 GABRG2P18507 467 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 ARL16Q0P5N6 197 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 SHHQ15465 462 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 PDLIM3Q53GG5 364 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 BEND2Q8NDZ0 799 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 OR6X1Q8NH79 312 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 ZNF552Q9H707 407 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 LOC102725191A0A1B0GVB3 256 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 ZNF732B4DXR9 585 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 KBTBD11O94819 623 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 GALNSP34059 522 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms