RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SIGLEC5O15389 551 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 AKR7A2O43488 359 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 CRTAPO75718 401 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 OR2A4O95047 310 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 LCATP04180 440 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 TNFRSF1AP19438 455 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 DUSP1P28562 367 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 CD34P28906 385 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 DVL1P1P54792 670 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 CARD18P57730 90 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 GRK1Q15835 563 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 RTL8BQ17RB0 113 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 GFOD2Q3B7J2 385 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 HES5Q5TA89 166 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 MBNL2Q5VZF2 373 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 STUMQ69YW2 141 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 LILRB2Q8N423 598 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 LY6G5BQ8NDX9 201 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 ANGPTL6Q8NI99 470 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF596Q8TC21 504 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 OR2A7Q96R45 310 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 TMPRSS13Q9BYE2 586 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 FXYD6Q9H0Q3 95 aa4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 ZMAT5Q9UDW3 170 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-201ENST00000260810 PSMB11A5LHX3 300 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 ZG16O60844 167 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 DMBX1Q8NFW5 382 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 OR5D18Q8NGL1 313 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 HYLS1Q96M11 299 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 CALHM2Q9HA72 323 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 C1orf123Q9NWV4 160 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 TIMM10BQ9Y5J6 103 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 TRGV5A0A0B4J1U4 118 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 A0A0D9SG52 128 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 OR5H1A6NKK0 313 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 TIMM8AO60220 97 aaPredicted RBP4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 PITX3O75364 302 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 PGA5P0DJD9 388 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 ANXA7P20073 488 aaKnown RBP4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 S100A10P60903 97 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 RELBQ01201 579 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 PLCXD3Q63HM9 321 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 ETFRF1Q6IPR1 90 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 TPRX1Q8N7U7 411 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 CFHR4Q92496 578 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 C10orf35Q96D05 121 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 TMEM231Q9H6L2 316 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 MYOZ1Q9NP98 299 aaPredicted RBP4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 OR52A1Q9UKL2 312 aa4.59□□□□□ -1.68
TOPBP1-201ENST00000260810 MEIS3P1A6NDR6 274 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 IQCF6A8MYZ5 107 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 ABCD4O14678 606 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 SHOXO15266 292 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 PHF1O43189 567 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 PPP3CBP16298 524 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 GNLYP22749 145 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 AKR1C2P52895 323 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 TAGLNQ01995 201 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 SRYQ05066 204 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 KISS1Q15726 138 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 CEACAM19Q7Z692 300 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF573Q86YE8 665 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 RNF2Q99496 336 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 C20orf202A1L168 122 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 TMEM235A6NFC5 223 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 ATP6V1G2-DDX39BF2Z307 99 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 RAMP3O60896 148 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 CST4P01036 141 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 TMEM225BP0DP42 221 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 GNB3P16520 340 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 CX3CR1P49238 355 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 TLE4Q04727 773 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 PEA15Q15121 130 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 TATDN3Q17R31 274 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 SCGB2B2Q4G0G5 96 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 MIDNQ504T8 468 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 DEGS2Q6QHC5 323 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 LRRC28Q86X40 367 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 OR52H1Q8NGJ2 320 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 OR1S1Q8NH92 325 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 SMIM4Q8WVI0 70 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 ARHGAP5-AS1Q96IT6 56 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 TREM2Q9NZC2 230 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 TAAR3PQ9P1P4 343 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 RAB22AQ9UL26 194 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF281Q9Y2X9 895 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 LINC00854A0A1B0GVQ3 168 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 CTDSPLO15194 276 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 IGKV1-5P01602 117 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 SCTP09683 121 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 RAB9AP51151 201 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 OR4K15Q8NH41 348 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 NUDCD2Q8WVJ2 157 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 ARL11Q969Q4 196 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 SH3BGRL3Q9H299 93 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 PIGMQ9H3S5 423 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 BANF2Q9H503 90 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 A0A0A6YYJ9 748 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 SH2D7A6NKC9 451 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 A6NNC1 897 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms