RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 IAPPP10997 89 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 DCAF10Q5QP82 559 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 SLC35E3Q7Z769 313 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 PSENENQ9NZ42 101 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 TRAPPC2LQ9UL33 140 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 TRAV39A0A0B4J263 110 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 LOC102723971A0A1B0GUV8 181 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 IGKV1-39P01597 117 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 IGKV1D-39P04432 117 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF16P17020 682 aaPredicted RBP15.89■□□□□ 0.13
CPSF3-201ENST00000238112 Q6P435 159 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 RSG1Q9BU20 258 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 RTL8AQ9BWD3 113 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 GPR87Q9BY21 358 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 SIRT7Q9NRC8 400 aa15.89■□□□□ 0.13
CPSF3-201ENST00000238112 LIN7CQ9NUP9 197 aaKnown RBP15.89■□□□□ 0.13
CPSF3-201ENST00000238112 CXorf65A6NEN9 183 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 SIRPB1O00241 398 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 TESK1Q15569 626 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 NCMAPQ5T1S8 102 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 OR1K1Q8NGR3 316 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 URGCP-MRPS24S4R325 110 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.88■□□□□ 0.13
CPSF3-201ENST00000238112 IGLV2-14P01704 120 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 METTL15P1P0C7V9 234 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 ELOBQ15370 118 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 IGFBP7Q16270 282 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF674Q2M3X9 581 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF343Q6P1L6 599 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 MDP1Q86V88 176 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 Q8WTZ3 238 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 TMPRSS5Q9H3S3 457 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 GSN-AS1Q9NRJ2 163 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 TREM2Q9NZC2 230 aa15.88■□□□□ 0.13
CPSF3-201ENST00000238112 KMT2EQ8IZD2 1858 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 IL18BPO95998 194 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 MT-CO3P00414 261 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 MEOX1P50221 254 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 HBG1P69891 147 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 HBG2P69892 147 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF787Q6DD87 383 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 LILRB2Q8N423 598 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 OR10G4Q8NGN3 311 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 RPRMQ9NS64 109 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 RNF150Q9ULK6 438 aa15.87■□□□□ 0.13
CPSF3-201ENST00000238112 C19orf67A6NJJ6 358 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 ZFP92A6NM28 416 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 C21orf140B9A014 251 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 OR2H2O95918 312 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 TMEM164Q5U3C3 297 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF497Q6ZNH5 498 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 Q8IYB0 196 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 COL27A1Q8IZC6 1860 aaPredicted RBP15.86■□□□□ 0.13
CPSF3-201ENST00000238112 WDR1O75083 606 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 IGKV1-5P01602 117 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 CD200P41217 278 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 GLIPR1P48060 266 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 RAB11AP62491 216 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF525Q8N782 197 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 BCL2L2Q92843 193 aaPredicted RBP15.86■□□□□ 0.13
CPSF3-201ENST00000238112 PSMG3Q9BT73 122 aaPredicted RBP15.86■□□□□ 0.13
CPSF3-201ENST00000238112 POLDIP2Q9Y2S7 368 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 KLF13Q9Y2Y9 288 aaPredicted RBP15.86■□□□□ 0.13
CPSF3-201ENST00000238112 R4GN57 208 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF407Q9C0G0 2248 aa15.86■□□□□ 0.13
CPSF3-201ENST00000238112 A0A1W2PR80 420 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 LINC00587B1AMM8 73 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 CXCL1P09341 107 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 TBC1D28Q2M2D7 210 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 FBXW9Q5XUX1 488 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 LCN15Q6UWW0 184 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 UBALD1Q8TB05 177 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 OR51M1Q9H341 326 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 CISD1Q9NZ45 108 aaKnown RBP15.85■□□□□ 0.13
CPSF3-201ENST00000238112 B4DEV8 164 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 ATXN7O15265 892 aaPredicted RBP15.85■□□□□ 0.13
CPSF3-201ENST00000238112 SP1P08047 785 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 BCL2P10415 239 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 ERVFRD-1P60508 538 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 TMEM9BQ9NQ34 198 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 OR14J1Q9UGF5 321 aa15.85■□□□□ 0.13
CPSF3-201ENST00000238112 KLRC4-KLRK1H3BQV0 150 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 PPIHO43447 177 aaKnown RBP15.84■□□□□ 0.13
CPSF3-201ENST00000238112 ARL16Q0P5N6 197 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 SLC10A1Q14973 349 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 DBX2Q6ZNG2 339 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 VASH2Q86V25 355 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF610Q8N9Z0 462 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 SCCPDHQ8NBX0 429 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 VSIRQ9H7M9 311 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF665Q9H7R5 613 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 MIOXQ9UGB7 285 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 NXPH2O95156 264 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF883P0CG24 379 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 CEACAM6P40199 344 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 ZNF585BQ52M93 769 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 WDR86Q86TI4 376 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 GP6Q9HCN6 339 aa15.84■□□□□ 0.13
CPSF3-201ENST00000238112 TGIF2-C20orf24A0A0A6YYL0 155 aa15.83■□□□□ 0.12
CPSF3-201ENST00000238112 YIF1AO95070 293 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms