RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 GVQW1Q8N7I0 195 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 ARL11Q969Q4 196 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 ST6GALNAC5Q9BVH7 336 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 ZNF286AQ9HBT8 521 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 RAB9BQ9NP90 201 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 ONECUT1Q9UBC0 465 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 MTFP1Q9UDX5 166 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 TRDCB7Z8K6 153 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 NAT1P18440 290 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 ARF6P62330 175 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 HLA-DRB3P79483 266 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 PYDC2Q56P42 97 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 DCAF12L2Q5VW00 463 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 HEPN1Q6WQI6 88 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 GDPD1Q8N9F7 314 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 MAFIPQ8WZ33 124 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 IFT46Q9NQC8 304 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 TMEM160Q9NX00 188 aa16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 RBMX2Q9Y388 322 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-221ENST00000622702 hCG_1809904A0A1W2PP81 198 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 A0A1W2PPE2 198 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 A0A1W2PR64 198 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 A0A1W2PRV1 198 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 MEIS3P1A6NDR6 274 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 SPINT2O43291 252 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 RBBP9O75884 186 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 HBZP02008 142 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 SSBP1Q04837 148 aaKnown RBP16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 Q8N402 240 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 Q8N7P7 452 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 BEST4Q8NFU0 473 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 OR10A7Q8NGE5 316 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 SIRPDQ9H106 197 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 KLK11Q9UBX7 282 aa16.27■□□□□ 0.19
PDLIM2-221ENST00000622702 IGKV1D-8A0A087WSZ0 117 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 J3QLI3 93 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 F2RL2O00254 374 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 FABP7O15540 132 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 CRLF1O75462 422 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 RCVRNP35243 200 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 ACTBP60709 375 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 ACTG1P63261 375 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 TMEM30BQ3MIR4 351 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 RNASE12Q5GAN4 147 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 FAM120AOSQ5T036 256 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 FAHD2BQ6P2I3 314 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 OR4A4PQ8NGN8 299 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 RFESDQ8TAC1 157 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 SNAPC3Q92966 411 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 FAHD2AQ96GK7 314 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 METTL8Q9H825 291 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 UNKLQ9H9P5 680 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 ANXA10Q9UJ72 324 aa16.26■□□□□ 0.19
PDLIM2-221ENST00000622702 DIRAS3O95661 229 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 SCTP09683 121 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 MMP9P14780 707 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 FPR2P25090 351 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 METTL11BQ5VVY1 283 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 IL17RELQ6ZVW7 336 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 OR1L1Q8NH94 360 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 GALMQ96C23 342 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 KIRREL1Q96J84 757 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 SDHCQ99643 169 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 BEX2Q9BXY8 128 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 WDR12Q9GZL7 423 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 IDI2-AS1Q9NZ38 188 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 ZNF107Q9UII5 783 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 CDC42EP3Q9UKI2 254 aa16.25■□□□□ 0.19
PDLIM2-221ENST00000622702 MMP23AO75900 390 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 GSTT2P0CG29 244 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 GSTT2BP0CG30 244 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 IGHV1-8P0DP01 117 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 HOXB4P17483 251 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 OMGP23515 440 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 PRTN3P24158 256 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 HTD2P86397 168 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 ZNF846Q147U1 533 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 CHRFAM7AQ494W8 412 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 PRAMEF5Q5TYX0 476 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 C5orf24Q7Z6I8 188 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 PRR18Q8N4B5 295 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 OR52M1Q8NGK5 317 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 UBALD1Q8TB05 177 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 TRIM63Q969Q1 353 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 THAP7Q9BT49 309 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 CABLES2Q9BTV7 478 aa16.24■□□□□ 0.19
PDLIM2-221ENST00000622702 IGKV1-6A0A0C4DH72 117 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 FCER2P06734 321 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 CD40LGP29965 261 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 GDNFP39905 211 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 PPP5CP53041 499 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 LOXL3P58215 753 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 ERVFRD-1P60508 538 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 HERPUD1Q15011 391 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 STEAP3Q658P3 488 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 OR52W1Q6IF63 320 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 LYSMD2Q8IV50 215 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 TMPRSS13Q9BYE2 586 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 C7orf69Q9H7B7 122 aa16.23■□□□□ 0.19
PDLIM2-221ENST00000622702 SESN1Q9Y6P5 492 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms