RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 P2RY1P47900 373 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF117Q03924 483 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 HERPUD1Q15011 391 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 HIST1H4GQ99525 98 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 ANAPC13Q9BS18 74 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 CD226Q15762 336 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 NT5CQ8TCD5 201 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 R3HDM4Q96D70 268 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 BDP1A6H8Y1 2624 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF729A6NN14 1252 aaPredicted RBP7.68□□□□□ -1.18
CSMD1-216ENST00000602557 CD74P04233 296 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 THBS4P35443 961 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF83P51522 516 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 SUMO3P55854 103 aaPredicted RBP7.68□□□□□ -1.18
CSMD1-216ENST00000602557 MOGAT1Q96PD6 335 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 PSG11Q9UQ72 335 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 WIPI2Q9Y4P8 454 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 LMO7DNF2Z398 122 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 CA1P00915 261 aaPredicted RBP7.68□□□□□ -1.18
CSMD1-216ENST00000602557 KISS1Q15726 138 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 TMEM108Q6UXF1 575 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 TMEM183AQ8IXX5 376 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 CA6P23280 308 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF793Q6ZN11 406 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 MMP25Q9NPA2 562 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF391Q9UJN7 358 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 DSCR4P56555 118 aaPredicted RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 RAE1P78406 368 aaKnown RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 WDR13Q9H1Z4 485 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 PLPP2O43688 288 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 CHST1O43916 411 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 Q8IYB0 196 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 ADTRPQ96IZ2 230 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 CDC14BO60729 498 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 FCGR3BO75015 233 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 TBC1D26Q86UD7 250 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 GUCD1Q96NT3 240 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 ABHD14AQ9BUJ0 271 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 PLA2G3Q9NZ20 509 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 TAAR3PQ9P1P4 343 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 IGHV3-13P01766 116 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 IGHV3-7P01780 117 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 HOXB3P14651 431 aaPredicted RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 UBE2L3P68036 154 aaKnown RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 ERRFI1Q9UJM3 462 aaPredicted RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 M0QZ24 198 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 LMX1BO60663 402 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 RUNX1Q01196 453 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 TEX30Q5JUR7 227 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 MRPL18Q9H0U6 180 aaKnown RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF430Q9H8G1 570 aaPredicted RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 CNTD2Q9H8S5 307 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 CACFD1Q9UGQ2 172 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 MTCH2Q9Y6C9 303 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 FHITP49789 147 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF502Q8TBZ5 544 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 DNAJB12Q9NXW2 375 aaKnown RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 PEF1Q9UBV8 284 aaKnown RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 SIGLEC7Q9Y286 467 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 OOEPA6NGQ2 149 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 OR1B1Q8NGR6 318 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 OR13G1Q8NGZ3 307 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 ZDHHC16Q969W1 377 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 SH2D2AQ9NP31 389 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 HILPDAQ9Y5L2 63 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 COL18A1P39060 1754 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 DHHO43323 396 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 HERVK_113P61574 105 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 TMEM240Q5SV17 173 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 OR8I2Q8N0Y5 310 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 NUDT10Q8NFP7 164 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 MVB12AQ96EY5 273 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 DNASE2O00115 360 aaPredicted RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 SNAI2O43623 268 aa7.67□□□□□ -1.18
CSMD1-216ENST00000602557 RNASE1P07998 156 aaKnown RBP7.67□□□□□ -1.18
CSMD1-216ENST00000602557 SH2D7A6NKC9 451 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-216ENST00000602557 KIAA1644Q3SXP7 199 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 ANKRD33Q7Z3H0 272 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 OR11G2Q8NGC1 345 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 OR4C3Q8NH37 302 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 RFESDQ8TAC1 157 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 PHF7Q9BWX1 381 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-216ENST00000602557 MFAP2P55001 183 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 P2RY6Q15077 328 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 MICBQ29980 383 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 NUDT11Q96G61 164 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 HSD17B10Q99714 261 aaKnown RBP7.66□□□□□ -1.18
CSMD1-216ENST00000602557 SEBOXQ9HB31 216 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-216ENST00000602557 MYO18BQ8IUG5 2567 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 SMPD2O60906 423 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 P2RY4P51582 365 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 CKS1BP61024 79 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 VMA21Q3ZAQ7 101 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 LYG1Q8N1E2 194 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 P01737 135 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 EWSR1Q01844 656 aaKnown RBP eCLIP7.66□□□□□ -1.18
CSMD1-216ENST00000602557 MRPL30Q8TCC3 161 aaKnown RBP7.66□□□□□ -1.18
CSMD1-216ENST00000602557 TSPAN32Q96QS1 320 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF831Q5JPB2 1677 aa7.66□□□□□ -1.18
CSMD1-216ENST00000602557 NHSL1Q5SYE7 1610 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms