RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 OR1L1Q8NH94 360 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 UBALD1Q8TB05 177 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 C14orf79Q96F83 325 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 OR1A1Q9P1Q5 309 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 SLC23A1Q9UHI7 598 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 OPN4Q9UHM6 478 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 A1L4Q6 167 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 C15orf65H3BRN8 121 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 ADAM20O43506 726 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 HBZP02008 142 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 ZNF728P0DKX0 622 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 PI3P19957 117 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 SSTR5P35346 364 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 TAS2R31P59538 309 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 FXYD4P59646 89 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 UBE2MP61081 183 aaKnown RBP17.26■□□□□ 0.35
PNKP-203ENST00000593946 AKAP14Q86UN6 197 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 TOMM40LQ969M1 308 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 TMEM230Q96A57 120 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 GALMQ96C23 342 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 MED28Q9H204 178 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 OR6C3Q9NZP0 311 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 CTSZQ9UBR2 303 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 SLC25A10Q9UBX3 287 aaPredicted RBP17.26■□□□□ 0.35
PNKP-203ENST00000593946 TACC2O95359 2948 aa17.26■□□□□ 0.35
PNKP-203ENST00000593946 J3QKU1 62 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 HEXAP06865 529 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 CTSDP07339 412 aaPredicted RBP17.25■□□□□ 0.35
PNKP-203ENST00000593946 COX6B1P14854 86 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 GZMHP20718 246 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 ZBTB25P24278 435 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 DHRS2Q13268 280 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 TMEM128Q5BJH2 165 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 CD276Q5ZPR3 534 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 SP5Q6BEB4 398 aaPredicted RBP17.25■□□□□ 0.35
PNKP-203ENST00000593946 MUC20Q8N307 709 aaPredicted RBP17.25■□□□□ 0.35
PNKP-203ENST00000593946 FGFRL1Q8N441 504 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 ZNF565Q8N9K5 539 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 ZFAND1Q8TCF1 268 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 ZNF69Q9UC07 566 aa17.25■□□□□ 0.35
PNKP-203ENST00000593946 C14orf166Q9Y224 244 aaKnown RBP17.25■□□□□ 0.35
PNKP-203ENST00000593946 FAM172BPA6NC97 362 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 F12P00748 615 aaPredicted RBP17.24■□□□□ 0.35
PNKP-203ENST00000593946 AKR1C4P17516 323 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 IL2RGP31785 369 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 DHODHQ02127 395 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 CD300CQ08708 224 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 PPP1R1AQ13522 171 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 ZNF431Q8TF32 576 aaPredicted RBP17.24■□□□□ 0.35
PNKP-203ENST00000593946 ARL11Q969Q4 196 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 CHODLQ9H9P2 273 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 OR2W1Q9Y3N9 320 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 MEX3AA1L020 520 aaKnown RBP17.24■□□□□ 0.35
PNKP-203ENST00000593946 HSPA12AO43301 675 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 CGB3P0DN86 165 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 CGB7P0DN87 165 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 LYG2Q86SG7 212 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 PPP1R14BQ96C90 147 aa17.24■□□□□ 0.35
PNKP-203ENST00000593946 YLPM1P49750 1951 aaKnown RBP17.24■□□□□ 0.35
PNKP-203ENST00000593946 IGKV1D-13A0A0B4J2D9 117 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 SPINT2O43291 252 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 NDUFB3O43676 98 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 SSNA1O43805 119 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 NDUFS7O75251 213 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 HLA-AP01891 365 aaKnown RBP17.23■□□□□ 0.35
PNKP-203ENST00000593946 IGKV1-13P0DP09 117 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 NDUFB7P17568 137 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 EFNA4P52798 201 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 FCN2Q15485 313 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 LRRC10Q5BKY1 277 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 TCF23Q7RTU1 214 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 SLC38A6Q8IZM9 456 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 RSRP1Q9BUV0 290 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 TOLLIPQ9H0E2 274 aa17.23■□□□□ 0.35
PNKP-203ENST00000593946 C9orf170A2RU37 121 aa17.22■□□□□ 0.35
PNKP-203ENST00000593946 CCNKO75909 580 aa17.22■□□□□ 0.35
PNKP-203ENST00000593946 HTD2P86397 168 aa17.22■□□□□ 0.35
PNKP-203ENST00000593946 AVPI1Q5T686 147 aa17.22■□□□□ 0.35
PNKP-203ENST00000593946 LDLRAD3Q86YD5 345 aa17.22■□□□□ 0.35
PNKP-203ENST00000593946 OR11H7Q8NGC8 314 aa17.22■□□□□ 0.35
PNKP-203ENST00000593946 CORO2AQ92828 525 aa17.22■□□□□ 0.35
PNKP-203ENST00000593946 TIMD4Q96H15 378 aa17.22■□□□□ 0.35
PNKP-203ENST00000593946 RDH8Q9NYR8 311 aa17.22■□□□□ 0.35
PNKP-203ENST00000593946 TRGV10A0A0A0MS01 117 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 DVL1O14640 695 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 SULT1A3P0DMM9 295 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 SULT1A4P0DMN0 295 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 RPS2P15880 293 aaKnown RBP17.21■□□□□ 0.35
PNKP-203ENST00000593946 CEACAM6P40199 344 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 TMEM33P57088 247 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 SUPT4H1P63272 117 aaKnown RBP17.21■□□□□ 0.35
PNKP-203ENST00000593946 RAB1CQ92928 201 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 ZNF486Q96H40 463 aaPredicted RBP17.21■□□□□ 0.35
PNKP-203ENST00000593946 ST6GAL2Q96JF0 529 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 CALYQ9NYX4 217 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 HELZ2Q9BYK8 2649 aaKnown RBP17.21■□□□□ 0.35
PNKP-203ENST00000593946 PPIHO43447 177 aaKnown RBP17.21■□□□□ 0.35
PNKP-203ENST00000593946 VAMP1P23763 118 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 GNRHRP30968 328 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 MEF2CQ06413 473 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms