RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 MAGEA13PA6NCF6 341 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 C15orf65H3BRN8 121 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 UCHL1P09936 223 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 SRMP19623 302 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 GNG10P50151 68 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 ZNF137PP52743 207 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 BLCAPP62952 87 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 MLLT11Q13015 90 aaPredicted RBP13.37□□□□□ -0.27
USB1-211ENST00000565662 ABCA11PQ4W5N1 156 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 C1orf100Q5SVJ3 147 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 SYT6Q5T7P8 510 aaPredicted RBP13.37□□□□□ -0.27
USB1-211ENST00000565662 BAIAP2L2Q6UXY1 529 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 REC114Q7Z4M0 266 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 CENPVQ7Z7K6 275 aaPredicted RBP13.37□□□□□ -0.27
USB1-211ENST00000565662 RFESDQ8TAC1 157 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 CHPT1Q8WUD6 406 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 ORAI1Q96D31 301 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 URM1Q9BTM9 101 aaKnown RBP13.37□□□□□ -0.27
USB1-211ENST00000565662 TMED9Q9BVK6 235 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 DUSP21Q9H596 190 aa13.37□□□□□ -0.27
USB1-211ENST00000565662 MBNL3Q9NUK0 354 aaKnown RBP13.37□□□□□ -0.27
USB1-211ENST00000565662 TSSC4Q9Y5U2 329 aaPredicted RBP13.37□□□□□ -0.27
USB1-211ENST00000565662 A0A1W2PPK0 400 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 PIN1P1O15428 100 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 KCNAB3O43448 404 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 SNRNP70P08621 437 aaKnown RBP13.36□□□□□ -0.27
USB1-211ENST00000565662 HTR2CP28335 458 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 CD1BP29016 333 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 SLC35B1P78383 322 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 HTD2P86397 168 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 TPBGQ13641 420 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 EBI3Q14213 229 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 IRF3Q14653 427 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 TBCEQ15813 527 aaPredicted RBP13.36□□□□□ -0.27
USB1-211ENST00000565662 LY6G6FQ5SQ64 297 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 SLC25A48Q6ZT89 311 aaKnown RBP13.36□□□□□ -0.27
USB1-211ENST00000565662 OR2W3Q7Z3T1 314 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 FOXRED2Q8IWF2 684 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 OR5AU1Q8NGC0 362 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 OR2T10Q8NGZ9 312 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 OR56B4Q8NH76 319 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 GHITMQ9H3K2 345 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 ABRACLQ9P1F3 81 aa13.36□□□□□ -0.27
USB1-211ENST00000565662 MEGF8Q7Z7M0 2845 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 IGHV1-3A0A0C4DH29 117 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 A0A1W2PP11 408 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 WIPF1O43516 503 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 MRPS14O60783 128 aaKnown RBP13.35□□□□□ -0.27
USB1-211ENST00000565662 LOXL3P58215 753 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 LTC4SQ16873 150 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 CEACAM19Q7Z692 300 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 DRAM1Q8N682 238 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 TM2D1Q9BX74 207 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 GPR61Q9BZJ8 451 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 Q9H521 79 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 ACOT13Q9NPJ3 140 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 NKX1-2Q9UD57 310 aaPredicted RBP13.35□□□□□ -0.27
USB1-211ENST00000565662 RAB26Q9ULW5 256 aa13.35□□□□□ -0.27
USB1-211ENST00000565662 C12orf77C9JDV5 145 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 SLC22A1O15245 554 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 DUS4LO95620 317 aaKnown RBP13.34□□□□□ -0.27
USB1-211ENST00000565662 MPIG6BO95866 241 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 PF4V1P10720 104 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 CPEP16870 476 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 CRHBPP24387 322 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 RPS27AP62979 156 aaKnown RBP13.34□□□□□ -0.27
USB1-211ENST00000565662 CD83Q01151 205 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 NSUN5P1Q3KNT7 163 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 LIPKQ5VXJ0 399 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 FAM71F2Q6NXP2 309 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 TGIF2LXQ8IUE1 241 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 C11orf44Q8N8P7 122 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 OR51D1Q8NGF3 324 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 CCDC107Q8WV48 283 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 RTN4IP1Q8WWV3 396 aaPredicted RBP13.34□□□□□ -0.27
USB1-211ENST00000565662 GALMQ96C23 342 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 R3HDM4Q96D70 268 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 OR5M11Q96RB7 305 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 CCDC90BQ9GZT6 254 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 BANF2Q9H503 90 aa13.34□□□□□ -0.27
USB1-211ENST00000565662 LIN7CQ9NUP9 197 aaKnown RBP13.34□□□□□ -0.27
USB1-211ENST00000565662 ANKRD65E5RJM6 399 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 RRP9O43818 475 aaKnown RBP13.33□□□□□ -0.28
USB1-211ENST00000565662 IGKV1D-33P01593 117 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 IGKV1-33P01594 117 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 HBZP02008 142 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 CD28P10747 220 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 CD37P11049 281 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 IZUMO2Q6UXV1 221 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 ZNF367Q7RTV3 350 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 MOB3BQ86TA1 216 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 LRRTM1Q86UE6 522 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 C5orf56Q8N8D9 126 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 TMEM104Q8NE00 496 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 CITED2Q99967 270 aaPredicted RBP13.33□□□□□ -0.28
USB1-211ENST00000565662 CENPOQ9BU64 300 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 PLGRKTQ9HBL7 147 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 TAF9BQ9HBM6 251 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 STEAP1Q9UHE8 339 aa13.33□□□□□ -0.28
USB1-211ENST00000565662 PSMB11A5LHX3 300 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms