RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 IGKV1D-13A0A0B4J2D9 117 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 PHF1O43189 567 aaPredicted RBP5.52□□□□□ -1.53
LINC00517-202ENST00000554257 AVPP01185 164 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 IGLV1-47P01700 117 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 IGKV1-13P0DP09 117 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 RPS2P15880 293 aaKnown RBP5.52□□□□□ -1.53
LINC00517-202ENST00000554257 HOXB4P17483 251 aaPredicted RBP5.52□□□□□ -1.53
LINC00517-202ENST00000554257 TBPP20226 339 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 HRH1P35367 487 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 CLEC2AQ6UVW9 174 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 HEPN1Q6WQI6 88 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 GLCCI1Q86VQ1 547 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 DUSP18Q8NEJ0 188 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 BEST4Q8NFU0 473 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 ST6GALNAC6Q969X2 333 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 Q96MF0 132 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 TMPRSS13Q9BYE2 586 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 REG4Q9BYZ8 158 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 OCEL1Q9H607 264 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 CALYQ9NYX4 217 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 LPAR3Q9UBY5 353 aa5.52□□□□□ -1.53
LINC00517-202ENST00000554257 KIR2DS1A0A191URI9 304 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 M0R1W7 72 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 SLC31A2O15432 143 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 ECDO95905 644 aaPredicted RBP5.51□□□□□ -1.53
LINC00517-202ENST00000554257 CSF1P09603 554 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 TALDO1P37837 337 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 DLX1P56177 255 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 BRWD1-AS2P59051 145 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 MORN2Q502X0 79 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 SPNS3Q6ZMD2 512 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 LINC00311Q8N616 119 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 TMEM185AQ8NFB2 350 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 SETD6Q8TBK2 473 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 MRGPRDQ8TDS7 321 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 GIMAP1Q8WWP7 306 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 TIMD4Q96H15 378 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 COX4I2Q96KJ9 171 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 TAF9BQ9HBM6 251 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 OR5H14A6NHG9 310 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 H7C1Q1 480 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 NDUFB3O43676 98 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 YPEL1O60688 119 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 PPIAL4GP0DN37 164 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 IGHV1-8P0DP01 117 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 USF1P22415 310 aaPredicted RBP5.51□□□□□ -1.53
LINC00517-202ENST00000554257 GNG2P59768 71 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 CDK10Q15131 360 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 Q3ZCU0 254 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 FBLN7Q53RD9 439 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 LRRC10Q5BKY1 277 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 RNASE12Q5GAN4 147 aaKnown RBP5.51□□□□□ -1.53
LINC00517-202ENST00000554257 TRAT1Q6PIZ9 186 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 GDPD3Q7L5L3 318 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 ASCC1Q8N9N2 400 aaKnown RBP5.51□□□□□ -1.53
LINC00517-202ENST00000554257 FAM216AQ8WUB2 273 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 CCDC107Q8WV48 283 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 YPEL2Q96QA6 119 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 IFI27L2Q9H2X8 130 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 ZNF286AQ9HBT8 521 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 GFOD1Q9NXC2 390 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 PCDHB10Q9UN67 800 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 GAB2Q9UQC2 676 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 SETXQ7Z333 2677 aaKnown RBP5.51□□□□□ -1.53
LINC00517-202ENST00000554257 ANK2Q01484 3957 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 ISPDA4D126 451 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 M0QYG6 137 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 FABP7O15540 132 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 TAS2R19P59542 299 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 ACTBP60709 375 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 RPL31P62899 125 aaKnown RBP5.51□□□□□ -1.53
LINC00517-202ENST00000554257 ACTG1P63261 375 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 OXA1LQ15070 435 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 STEAP1BQ6NZ63 245 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 OR11H6Q8NGC7 330 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 TMEM230Q96A57 120 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 MOB3AQ96BX8 217 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 RTBDNQ9BSG5 229 aaPredicted RBP5.51□□□□□ -1.53
LINC00517-202ENST00000554257 RSRP1Q9BUV0 290 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 IDI2-AS1Q9NZ38 188 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 OR6C3Q9NZP0 311 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 VSIG4Q9Y279 399 aa5.51□□□□□ -1.53
LINC00517-202ENST00000554257 RNASEK-C17orf49H0YIS7 233 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 PMP2P02689 132 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 FPR2P25090 351 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 DHODHQ02127 395 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 EDDM3AQ14507 147 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 MSMO1Q15800 293 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 KLF17Q5JT82 389 aaPredicted RBP5.5□□□□□ -1.53
LINC00517-202ENST00000554257 PRAMEF5Q5TYX0 476 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 SLC25A48Q6ZT89 311 aaKnown RBP5.5□□□□□ -1.53
LINC00517-202ENST00000554257 OR52L2PQ8NGH6 319 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 UPRTQ96BW1 309 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 ZNRD1Q9P1U0 126 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 JPT1Q9UK76 154 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 MGAT4AQ9UM21 535 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 MRPS7Q9Y2R9 242 aaKnown RBP5.5□□□□□ -1.53
LINC00517-202ENST00000554257 FASNP49327 2511 aaKnown RBP5.5□□□□□ -1.53
LINC00517-202ENST00000554257 MEIKINA0A087WXM9 373 aa5.5□□□□□ -1.53
LINC00517-202ENST00000554257 RNF223E7ERA6 249 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms