RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 OR2W1Q9Y3N9 320 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 JMJD7P0C870 316 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 PGA5P0DJD9 388 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 FGF8P55075 233 aaPredicted RBP14.98□□□□□ -0.01
SYNE3-202ENST00000553340 SSTP61278 116 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 ZFP36L1Q07352 338 aaKnown RBP14.98□□□□□ -0.01
SYNE3-202ENST00000553340 MKXQ8IYA7 352 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 ZDHHC23Q8IYP9 409 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 REPIN1Q9BWE0 567 aaKnown RBP14.98□□□□□ -0.01
SYNE3-202ENST00000553340 VSIRQ9H7M9 311 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 VAX2Q9UIW0 290 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 PITPNC1Q9UKF7 332 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 WDR87Q6ZQQ6 2873 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 SMCO3A2RU48 225 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 P04436 131 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 PSG2P11465 335 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 CCNOP22674 350 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 IL11RAQ14626 422 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 ZNF726P1Q15940 193 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 CEACAM21Q3KPI0 293 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 AGBL5Q8NDL9 886 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 OR10J5Q8NHC4 309 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 SNX22Q96L94 193 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 SGCZQ96LD1 299 aa14.98□□□□□ -0.01
SYNE3-202ENST00000553340 FGF23Q9GZV9 251 aaPredicted RBP14.98□□□□□ -0.01
SYNE3-202ENST00000553340 PHOX2AO14813 284 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 SYNGR2O43760 224 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 KLF7O75840 302 aaPredicted RBP14.97□□□□□ -0.01
SYNE3-202ENST00000553340 IFNA1P01562 189 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 DDTP30046 118 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 SERF2P84101 59 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 ACSF3Q4G176 576 aaPredicted RBP14.97□□□□□ -0.01
SYNE3-202ENST00000553340 MRGPRGQ86SM5 289 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 GTF3AQ92664 365 aaKnown RBP14.97□□□□□ -0.01
SYNE3-202ENST00000553340 CLDN23Q96B33 292 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 HIST1H2BLQ99880 126 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 PHF7Q9BWX1 381 aaPredicted RBP14.97□□□□□ -0.01
SYNE3-202ENST00000553340 OR14J1Q9UGF5 321 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 A0A0G2JMM0 328 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 A0A1W2PPB8 328 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 A0A1W2PRS3 328 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 CEBPZOSA8MTT3 80 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 KIR3DP1A8MWS1 328 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 C9J4A7 227 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 IFNA10P01566 189 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 IZUMO4Q1ZYL8 232 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 SSX9Q7RTT3 188 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 MRPL21Q7Z2W9 205 aaKnown RBP14.97□□□□□ -0.01
SYNE3-202ENST00000553340 REC114Q7Z4M0 266 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 ZNF525Q8N782 197 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 MRPL30Q8TCC3 161 aaKnown RBP14.97□□□□□ -0.01
SYNE3-202ENST00000553340 PSENENQ9NZ42 101 aa14.97□□□□□ -0.01
SYNE3-202ENST00000553340 METTL15P1P0C7V9 234 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 MDH2P40926 338 aaKnown RBP14.96□□□□□ -0.01
SYNE3-202ENST00000553340 HBG1P69891 147 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 HBG2P69892 147 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 ZNF324BQ6AW86 544 aaPredicted RBP14.96□□□□□ -0.01
SYNE3-202ENST00000553340 ZNF880Q6PDB4 577 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 Q6ZRM9 215 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 PSMF1Q92530 271 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 ADGRG7Q96K78 797 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 SSX3Q99909 188 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 CDH20Q9HBT6 801 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 CACNG5Q9UF02 275 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 ERRFI1Q9UJM3 462 aaPredicted RBP14.96□□□□□ -0.01
SYNE3-202ENST00000553340 IGHV3-9P01782 118 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 NRN1LQ496H8 165 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 SPEM1Q8N4L4 309 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 OR10A7Q8NGE5 316 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 ABHD3Q8WU67 409 aa14.96□□□□□ -0.01
SYNE3-202ENST00000553340 LSM10Q969L4 123 aaKnown RBP14.96□□□□□ -0.01
SYNE3-202ENST00000553340 CACNA1EQ15878 2313 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 CD300LBA8K4G0 201 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 TRAPPC6AO75865 159 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 IAPPP10997 89 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 LRRC75BQ2VPJ9 315 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 C20orf204Q6ZNR8 217 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 SSX7Q7RTT5 188 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 LILRB2Q8N423 598 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 OR5R1Q8NH85 324 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 PINX1Q96BK5 328 aaKnown RBP14.96□□□□□ -0.02
SYNE3-202ENST00000553340 PLK3Q9H4B4 646 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 CRIM1Q9NZV1 1036 aa14.96□□□□□ -0.02
SYNE3-202ENST00000553340 A0A087X0M5 115 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 A0A1B0GX30 115 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 IL2RGP31785 369 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 ARL16Q0P5N6 197 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 TMEM41BQ5BJD5 291 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 C17orf78Q8N4C9 275 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 TRBV6-6A0A0A6YYG2 114 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 LRP5LA4QPB2 252 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 MAP1LC3B2A6NCE7 125 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 CYTIPO60759 359 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 RFPL3SP0C7P2 107 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 CLN3Q13286 438 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 WIPI1Q5MNZ9 446 aaPredicted RBP14.95□□□□□ -0.02
SYNE3-202ENST00000553340 WDR25Q64LD2 544 aaPredicted RBP14.95□□□□□ -0.02
SYNE3-202ENST00000553340 FAM180AQ6UWF9 173 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 LINC00596Q86U02 117 aa14.95□□□□□ -0.02
SYNE3-202ENST00000553340 TMEM183AQ8IXX5 376 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms