RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 CCDC107Q8WV48 283 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 NUDCD2Q8WVJ2 157 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 H1FXQ92522 213 aaKnown RBP8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 S100A16Q96FQ6 103 aaKnown RBP8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 DMRTB1Q96MA1 342 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 TBX15Q96SF7 602 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 C6orf62Q9GZU0 229 aaPredicted RBP8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 TBC1D24Q9ULP9 559 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 LINC00312Q9Y6C7 94 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 V9GYH0 126 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 NAV3Q8IVL0 2385 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 MEIKINA0A087WXM9 373 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 IGKV1-6A0A0C4DH72 117 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 A0A0G2JMP0 313 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 A0A0X1KG70 313 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 SERPINE3A8MV23 424 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 C12orf77C9JDV5 145 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 H3BUI4 141 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 ENSAO43768 121 aaKnown RBP8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 FSHBP01225 129 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 ZNF728P0DKX0 622 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 SSTR5P35346 364 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 NKX2-5P52952 324 aaPredicted RBP8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 ARF6P62330 175 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 PRB3Q04118 309 aaPredicted RBP8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 RBM39Q14498 530 aaKnown RBP8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 FAM189A2Q15884 450 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 TMEM69Q5SWH9 247 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 FAM185AQ8N0U4 392 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 KIR3DL3Q8N743 410 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 GDPD1Q8N9F7 314 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 OR4M2Q8NGB6 313 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 MRGPRDQ8TDS7 321 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 Q9N2K0 584 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 EXTL2Q9UBQ6 330 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 ANAPC10Q9UM13 185 aa8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 UBE2J1Q9Y385 318 aaPredicted RBP8.75□□□□□ -1.01
NPIPB3-210ENST00000542817 KBTBD11-OT1A0A1B0GTJ5 212 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 hADV38S2A0JD32 116 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 SCGNO76038 276 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 LIPFP07098 398 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 FCGR3AP08637 254 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 OR3A3P47888 321 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 HMGN3Q15651 99 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 ZNF79Q15937 498 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 PNLIPRP3Q17RR3 467 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 KLF17Q5JT82 389 aaPredicted RBP8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 C1orf122Q6ZSJ8 110 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 SLC51BQ86UW2 128 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 CCDC28AQ8IWP9 274 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 UBALD1Q8TB05 177 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 UNKLQ9H9P5 680 aaKnown RBP8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 CALYQ9NYX4 217 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 ZNF230Q9UIE0 474 aaPredicted RBP8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 ADAM30Q9UKF2 790 aa8.74□□□□□ -1.01
NPIPB3-210ENST00000542817 TRGV10A0A0A0MS01 117 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 M0R1W7 72 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 F2RL2O00254 374 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 BET1O15155 118 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 RGS5O15539 181 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 TPPPO94811 219 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 C1QBP02746 253 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 OMGP23515 440 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 RFX2P48378 723 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 LOXL3P58215 753 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 HERPUD1Q15011 391 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 DCAF12L2Q5VW00 463 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 HEPN1Q6WQI6 88 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 Q6ZS49 121 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 NRARPQ7Z6K4 114 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 GLCCI1Q86VQ1 547 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 GVQW1Q8N7I0 195 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 DUSP18Q8NEJ0 188 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 OR1L1Q8NH94 360 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 NEK7Q8TDX7 302 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 GPX8Q8TED1 209 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 MAFIPQ8WZ33 124 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 SNAPC3Q92966 411 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 AJUBAQ96IF1 538 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 ZNF714Q96N38 554 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 CMSS1Q9BQ75 279 aaKnown RBP8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 OCSTAMPQ9BR26 566 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 C12orf4Q9NQ89 552 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 TAS2R3Q9NYW6 316 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 OR6C3Q9NZP0 311 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 LPAR3Q9UBY5 353 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 NUP50Q9UKX7 468 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 KPTNQ9Y664 436 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 AUP1Q9Y679 476 aa8.73□□□□□ -1.01
NPIPB3-210ENST00000542817 A0A087X0M5 115 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 A0A1B0GX30 115 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 A0A1W2PQ09 198 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 MEIS3P1A6NDR6 274 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 ZNF729A6NN14 1252 aaPredicted RBP8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 POM121CA8CG34 1229 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 RNASEK-C17orf49H0YIS7 233 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 J3QLI3 93 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 LANCL1O43813 399 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 ORC5O43913 435 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 HBZP02008 142 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms