RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 TAF9Q16594 264 aa13□□□□□ -0.33
CLPTM1-202ENST00000541297 PIGYQ3MUY2 71 aa13□□□□□ -0.33
CLPTM1-202ENST00000541297 UBAC2Q8NBM4 344 aa13□□□□□ -0.33
CLPTM1-202ENST00000541297 MRPL24Q96A35 216 aaKnown RBP13□□□□□ -0.33
CLPTM1-202ENST00000541297 IGKV1D-8A0A087WSZ0 117 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 A8MXE2 369 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 OPRM1P35372 400 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 PMELP40967 661 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 NPBWR2P48146 333 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 PDCD1Q15116 288 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 FAM89BQ8N5H3 189 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 TCTEX1D2Q8WW35 142 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 HIST1H2AAQ96QV6 131 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 A0A1W2PPE2 198 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 UMAD1C9J7I0 102 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 C1QL1O75973 258 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 MPV17P39210 176 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 SULT1A1P50225 295 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 GGNBP1Q5YKI7 109 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 FBXW12Q6X9E4 464 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 PECRQ9BY49 303 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 ZNF701Q9NV72 531 aaPredicted RBP12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 COL6A6A6NMZ7 2263 aa12.99□□□□□ -0.33
CLPTM1-202ENST00000541297 IGHV3-64DA0A0J9YX35 117 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 MED19A0JLT2 244 aaPredicted RBP12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 M0R1B8 84 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 AP4M1O00189 453 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 MSTNO14793 375 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 IGLV1-44P01699 117 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 KLRB1Q12918 225 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 PSG7Q13046 419 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 NCMAPQ5T1S8 102 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 C22orf34Q6ZV56 151 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 C6orf201Q7Z4U5 140 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 KLF14Q8TD94 323 aaPredicted RBP12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 CD300LFQ8TDQ1 290 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 SLAMF9Q96A28 289 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 Q96M66 194 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 OBP2BQ9NPH6 170 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 SHANK1Q9Y566 2161 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 IGHV2OR16-5A0A0B4J2B6 119 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 GEMIN2O14893 280 aaKnown RBP12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 DANCRP0C864 163 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 SELLP14151 372 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 CAMLGP49069 296 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 RBPJQ06330 500 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 TIMM23BQ5SRD1 257 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 FBXL14Q8N1E6 418 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 OR5P3Q8WZ94 311 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 ZNF2Q9BSG1 426 aaPredicted RBP12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 TM2D1Q9BX74 207 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 WFDC1Q9HC57 220 aa12.98□□□□□ -0.33
CLPTM1-202ENST00000541297 A0A1B0GV50 99 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 FOXI3A8MTJ6 420 aaPredicted RBP12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 C3orf80F5H4A9 247 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 J3QW42 95 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 SLC34A2O95436 690 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 LY6DQ14210 128 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 SURF2Q15527 256 aaPredicted RBP12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 FAM189A2Q15884 450 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 BRICD5Q6PL45 260 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 SGPP2Q8IWX5 399 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 KDF1Q8NAX2 398 aaPredicted RBP12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 FBXO7Q9Y3I1 522 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 TRGV8A0A0C4DH27 118 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 IFNA21P01568 189 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 RD3LP0DJH9 198 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 BCL3P20749 454 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 OSR2Q8N2R0 312 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 OR5A2Q8NGI9 324 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 MUCL1Q96DR8 90 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 ARV1Q9H2C2 271 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 ST3GAL6Q9Y274 331 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 MPC1Q9Y5U8 109 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 PPIHO43447 177 aaKnown RBP12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 OR13C7P0DN81 318 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 BTF3P20290 206 aaKnown RBP12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 FABP6P51161 128 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 PPA1Q15181 289 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 COMMD1Q8N668 190 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 ZNF565Q8N9K5 539 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 MARS2Q96GW9 593 aaKnown RBP12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 SH3BGRL3Q9H299 93 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 C19orf12Q9NSK7 152 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 PLEKHJ1Q9NW61 149 aa12.97□□□□□ -0.33
CLPTM1-202ENST00000541297 SYNGR1O43759 233 aa12.96□□□□□ -0.33
CLPTM1-202ENST00000541297 MBPP02686 304 aaPredicted RBP12.96□□□□□ -0.33
CLPTM1-202ENST00000541297 PRH1P02810 166 aa12.96□□□□□ -0.33
CLPTM1-202ENST00000541297 RAC2P15153 192 aa12.96□□□□□ -0.33
CLPTM1-202ENST00000541297 SP6Q3SY56 376 aa12.96□□□□□ -0.33
CLPTM1-202ENST00000541297 HS3ST6Q96QI5 342 aa12.96□□□□□ -0.33
CLPTM1-202ENST00000541297 HDHD3Q9BSH5 251 aaPredicted RBP12.96□□□□□ -0.33
CLPTM1-202ENST00000541297 PLEKHA2Q9HB19 425 aa12.96□□□□□ -0.33
CLPTM1-202ENST00000541297 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLPTM1-202ENST00000541297 POLEQ07864 2286 aa12.96□□□□□ -0.34
CLPTM1-202ENST00000541297 ICE1Q9Y2F5 2266 aa12.96□□□□□ -0.34
CLPTM1-202ENST00000541297 SEC11BP0C7V7 166 aa12.96□□□□□ -0.34
CLPTM1-202ENST00000541297 CCKARP32238 428 aa12.96□□□□□ -0.34
CLPTM1-202ENST00000541297 MRGPRGQ86SM5 289 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms