RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 M0QZ24 198 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 SDCBPO00560 298 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 DENRO43583 198 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 ARL6IP5O75915 188 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 CHATP28329 748 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 MNDAP41218 407 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 ARHGDIBP52566 201 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 GABARAPL2P60520 117 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 EMX1Q04741 257 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 MADCAM1Q13477 382 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 C16orf82Q7Z2V1 217 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 LINC00311Q8N616 119 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 OR6M1Q8NGM8 313 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 KCNG3Q8TAE7 436 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 WIPF2Q8TF74 440 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 CFHR4Q92496 578 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 TOMM40LQ969M1 308 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 RBM14Q96PK6 669 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 TMEM59Q9BXS4 323 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 LIN7BQ9HAP6 207 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 TRAPPC2LQ9UL33 140 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 AK6Q9Y3D8 172 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 IGHV3-43A0A0B4J1X8 118 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 A0A1W2PPI3 338 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 SLC17A2O00624 439 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 MRPS14O60783 128 aaKnown RBP9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 OR2F2O95006 317 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 BPNT1O95861 308 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 HBZP02008 142 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 AMY1AP04745 511 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 AMY2AP04746 511 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 IGHV3-43DP0DP04 118 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 RCC1P18754 421 aaPredicted RBP9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 C6orf183Q5T699 404 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 HIST2H2BDQ6DRA6 164 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 Q6ZTK2 550 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 THNSL2Q86YJ6 484 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 C8orf31Q8N9H6 132 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 OR10X1Q8NGY0 326 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 MRPL30Q8TCC3 161 aaKnown RBP9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 SULT4A1Q9BR01 284 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 OCSTAMPQ9BR26 566 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 NICN1Q9BSH3 213 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 SLC25A33Q9BSK2 321 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 WNT10AQ9GZT5 417 aa9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 MBNL3Q9NUK0 354 aaKnown RBP9.28□□□□□ -0.92
SH3RF1-205ENST00000511421 A0A0A6YYD4 124 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 SPINT2O43291 252 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 VSIG10L2P0DP72 767 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 CALRP27797 417 aaKnown RBP9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 RAB7AP51149 207 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 P2RY14Q15391 338 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 Q3ZCU0 254 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 CD200R1LQ6Q8B3 271 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 C6orf201Q7Z4U5 140 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 C5orf24Q7Z6I8 188 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 OR8H3Q8N146 312 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 DRAM1Q8N682 238 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 C11orf44Q8N8P7 122 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 ZNF439Q8NDP4 499 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 OR1L1Q8NH94 360 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 NEDD4LQ96PU5 975 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 LPAR5Q9H1C0 372 aa9.27□□□□□ -0.93
SH3RF1-205ENST00000511421 SHISA3A0PJX4 238 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 SLC31A2O15432 143 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 TSPAN15O95858 294 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 SNRNP70P08621 437 aaKnown RBP9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 FAM106CPP0CH98 169 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 ZNF134P52741 427 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 ZNF816Q0VGE8 651 aaPredicted RBP9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 TMEM95Q3KNT9 176 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 TMEM30BQ3MIR4 351 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 TRAT1Q6PIZ9 186 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 OR2W3Q7Z3T1 314 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 ZNF554Q86TJ5 538 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 FAM89BQ8N5H3 189 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 OR56B4Q8NH76 319 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 CAPSLQ8WWF8 208 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 ST6GALNAC6Q969X2 333 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 AKR1E2Q96JD6 320 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 FAAP24Q9BTP7 215 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 MMP27Q9H306 513 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 Q9H521 79 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 PLGRKTQ9HBL7 147 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 TAF9BQ9HBM6 251 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 RAB9BQ9NP90 201 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 NDUFB11Q9NX14 153 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 FOXI3A8MTJ6 420 aaPredicted RBP9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 HSD17B6O14756 317 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 ARSBP15848 533 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 BLVRBP30043 206 aaPredicted RBP9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 VDAC2P45880 294 aaPredicted RBP9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 RAB11BQ15907 218 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 CT45A1Q5HYN5 189 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 UBE2UQ5VVX9 321 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 Q6ZPA2 131 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 SLC25A48Q6ZT89 311 aaKnown RBP9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 SPARTQ8N0X7 666 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 PRR18Q8N4B5 295 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms