RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 IP6K3Q96PC2 410 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 PEBP4Q96S96 227 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 MARVELD1Q9BSK0 173 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 TMEM208Q9BTX3 173 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 C1orf50Q9BV19 199 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 CDCA4Q9BXL8 241 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 MRPS26Q9BYN8 205 aaKnown RBP1.38□□□□□ -2.19
LMNB1-207ENST00000494185 MS4A6AQ9H2W1 248 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 FBXL15Q9H469 300 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 MAP1LC3AQ9H492 121 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 PAQR5Q9NXK6 330 aaPredicted RBP1.38□□□□□ -2.19
LMNB1-207ENST00000494185 EMC3Q9P0I2 261 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 OPN4Q9UHM6 478 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 GLS2Q9UI32 602 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 RWDD2AQ9UIY3 292 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 ZNF706Q9Y5V0 76 aaPredicted RBP1.38□□□□□ -2.19
LMNB1-207ENST00000494185 S4R3C0 116 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 MYO15BQ96JP2 1530 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 MYO10Q9HD67 2058 aa1.38□□□□□ -2.19
LMNB1-207ENST00000494185 COL4A4P53420 1690 aaPredicted RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 BTNL10A8MVZ5 291 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 F5H5T6 163 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 M0QYV0 167 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 ISLRO14498 428 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 RGS5O15539 181 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 OR5AC1P0C628 307 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 CD28P10747 220 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 PTHLHP12272 177 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 IDO1P14902 403 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 MUC1P15941 1255 aaPredicted RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 PSMA1P25786 263 aaKnown RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 SLCO1A2P46721 670 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 IDH2P48735 452 aaKnown RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 AP2S1P53680 142 aaPredicted RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 H2BFSP57053 126 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 ACTBP60709 375 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 DAD1P61803 113 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 ACTG1P63261 375 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 SMAGPQ0VAQ4 97 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 C1DQ13901 141 aaKnown RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 SPCS2Q15005 226 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 EBPQ15125 230 aaKnown RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 TMEM241Q24JQ0 296 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 LINC00483Q53H64 154 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 ZNF880Q6PDB4 577 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 ZNF615Q8N8J6 731 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 APCDD1LQ8NCL9 501 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 OR10D3Q8NH80 312 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 CYGBQ8WWM9 190 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 RTN4IP1Q8WWV3 396 aaPredicted RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 RAB8BQ92930 207 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 TESCQ96BS2 214 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 RBMXL1Q96E39 390 aaKnown RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 PYURFQ96I23 114 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 OR7D2Q96RA2 312 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 STACQ99469 402 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 ZNF436Q9C0F3 470 aaPredicted RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 OR51B6Q9H340 312 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 TRIM45Q9H8W5 580 aaPredicted RBP1.37□□□□□ -2.19
LMNB1-207ENST00000494185 LINC00574Q9H8X3 128 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 C8orf4Q9NR00 106 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 PARVAQ9NVD7 372 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 TMEM38BQ9NVV0 291 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 SLC22A7Q9Y694 548 aa1.37□□□□□ -2.19
LMNB1-207ENST00000494185 IGHV3OR15-7A0A075B7D8 119 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.36□□□□□ -2.19
LMNB1-207ENST00000494185 IGHV3-21A0A0B4J1V1 117 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 ARGFXA6NJG6 315 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 LEUTXA8MZ59 168 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 IGLL5B9A064 214 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 F5H5P2 479 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.36□□□□□ -2.19
LMNB1-207ENST00000494185 COPEO14579 308 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 ARL6IP5O75915 188 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 CIAO1O76071 339 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 LTAP01374 205 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 CALB1P05937 261 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 IL3P08700 152 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 CTXN2P0C2S0 81 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 ZNF286BP0CG31 522 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 MLNP12872 115 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 ZNF7P17097 686 aaPredicted RBP1.36□□□□□ -2.19
LMNB1-207ENST00000494185 MYL12AP19105 171 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 GADD45AP24522 165 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 DDTP30046 118 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 RAP1GDS1P52306 607 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 RAB2AP61019 212 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 FMODQ06828 376 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 ZNF616Q08AN1 781 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 FUT5Q11128 374 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 ENDOGQ14249 297 aaKnown RBP1.36□□□□□ -2.19
LMNB1-207ENST00000494185 CASP8Q14790 479 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 PDK2Q15119 407 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 ALX1Q15699 326 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 TMEM176BQ3YBM2 270 aaPredicted RBP1.36□□□□□ -2.19
LMNB1-207ENST00000494185 AKIRIN2Q53H80 203 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 Q6ZRU5 148 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 FAM19A3Q7Z5A8 133 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 MARCH3Q86UD3 253 aa1.36□□□□□ -2.19
LMNB1-207ENST00000494185 ZNF695Q8IW36 515 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms