RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 GNMTQ14749 295 aa15.94■□□□□ 0.14
USP39-218ENST00000493829 ZNF782Q6ZMW2 699 aaPredicted RBP15.94■□□□□ 0.14
USP39-218ENST00000493829 TMEM229BQ8NBD8 167 aa15.94■□□□□ 0.14
USP39-218ENST00000493829 LY6G5BQ8NDX9 201 aa15.94■□□□□ 0.14
USP39-218ENST00000493829 OR10V1Q8NGI7 309 aa15.94■□□□□ 0.14
USP39-218ENST00000493829 CORO2AQ92828 525 aa15.94■□□□□ 0.14
USP39-218ENST00000493829 EHFQ9NZC4 300 aa15.94■□□□□ 0.14
USP39-218ENST00000493829 OR1A1Q9P1Q5 309 aa15.94■□□□□ 0.14
USP39-218ENST00000493829 MGAT4AQ9UM21 535 aa15.94■□□□□ 0.14
USP39-218ENST00000493829 IGHV3-7P01780 117 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 MSMBP08118 114 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 GZMHP20718 246 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 NFYBP25208 207 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 OR3A3P47888 321 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 TAS2R46P59540 309 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 ARF6P62330 175 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 STEAP1BQ6NZ63 245 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 Q6ZS49 121 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 OR5AP2Q8NGF4 316 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 OR52L2PQ8NGH6 319 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 TAS2R8Q9NYW2 309 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 SLC23A1Q9UHI7 598 aa15.93■□□□□ 0.14
USP39-218ENST00000493829 NOTCH2Q04721 2471 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 RAB3DO95716 219 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 CGB3P0DN86 165 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 CGB7P0DN87 165 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 DLX6P56179 175 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 PAX2Q02962 417 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 SRSF7Q16629 238 aaKnown RBP eCLIP15.92■□□□□ 0.14
USP39-218ENST00000493829 CR1LQ2VPA4 569 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 TMEM249Q2WGJ8 235 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 RNASE10Q5GAN6 216 aaKnown RBP15.92■□□□□ 0.14
USP39-218ENST00000493829 UTF1Q5T230 341 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 OR4C16Q8NGL9 310 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 OR4A4PQ8NGN8 299 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 LEAP2Q969E1 77 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 GALMQ96C23 342 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 NECAP2Q9NVZ3 263 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 MCUBQ9NWR8 336 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 TAS2R3Q9NYW6 316 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 YLPM1P49750 1951 aaKnown RBP15.92■□□□□ 0.14
USP39-218ENST00000493829 A0A1W2PPH5 198 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 POM121CA8CG34 1229 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 B4DSR2 109 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 HSPA12AO43301 675 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 AKAIN1P0CW23 69 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 IGHV4-31P0DP07 118 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 AP3S2P59780 193 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 CDK10Q15131 360 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 OR56B4Q8NH76 319 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 COX4I2Q96KJ9 171 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 AKAP9Q99996 3911 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 GINS4Q9BRT9 223 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 TMPRSS13Q9BYE2 586 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 IDI2-AS1Q9NZ38 188 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 OPN4Q9UHM6 478 aa15.92■□□□□ 0.14
USP39-218ENST00000493829 SETXQ7Z333 2677 aaKnown RBP15.91■□□□□ 0.14
USP39-218ENST00000493829 AMY2AP04746 511 aa15.91■□□□□ 0.14
USP39-218ENST00000493829 ZNF16P17020 682 aaPredicted RBP15.91■□□□□ 0.14
USP39-218ENST00000493829 PPP1CCP36873 323 aaKnown RBP15.91■□□□□ 0.14
USP39-218ENST00000493829 BTNL3Q6UXE8 466 aa15.91■□□□□ 0.14
USP39-218ENST00000493829 LINC01356Q8N9X3 169 aa15.91■□□□□ 0.14
USP39-218ENST00000493829 DACT3Q96B18 629 aaPredicted RBP15.91■□□□□ 0.14
USP39-218ENST00000493829 MSI2Q96DH6 328 aaKnown RBP15.91■□□□□ 0.14
USP39-218ENST00000493829 CABLES2Q9BTV7 478 aa15.91■□□□□ 0.14
USP39-218ENST00000493829 SUCNR1Q9BXA5 334 aa15.91■□□□□ 0.14
USP39-218ENST00000493829 OR2S2Q9NQN1 319 aa15.91■□□□□ 0.14
USP39-218ENST00000493829 GNG12Q9UBI6 72 aa15.91■□□□□ 0.14
USP39-218ENST00000493829 TBC1D24Q9ULP9 559 aa15.91■□□□□ 0.14
USP39-218ENST00000493829 CYSRT1A8MQ03 144 aa15.9■□□□□ 0.14
USP39-218ENST00000493829 OR5H8P0DN80 308 aa15.9■□□□□ 0.14
USP39-218ENST00000493829 NFYAP23511 347 aaPredicted RBP15.9■□□□□ 0.14
USP39-218ENST00000493829 FPR2P25090 351 aa15.9■□□□□ 0.14
USP39-218ENST00000493829 DVL1P1P54792 670 aaPredicted RBP15.9■□□□□ 0.14
USP39-218ENST00000493829 ACTBL2Q562R1 376 aa15.9■□□□□ 0.14
USP39-218ENST00000493829 OR10J5Q8NHC4 309 aa15.9■□□□□ 0.14
USP39-218ENST00000493829 PARP12Q9H0J9 701 aaKnown RBP15.9■□□□□ 0.14
USP39-218ENST00000493829 HRASLSQ9HDD0 168 aa15.9■□□□□ 0.14
USP39-218ENST00000493829 SIRT7Q9NRC8 400 aa15.9■□□□□ 0.14
USP39-218ENST00000493829 NPIPB11E5RHQ5 1161 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 CD74P04233 296 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 IFNA6P05013 189 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 GNG10P50151 68 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 DCTN2Q13561 401 aaKnown RBP15.89■□□□□ 0.13
USP39-218ENST00000493829 SCGB2B2Q4G0G5 96 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 ZNF554Q86TJ5 538 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 PCGF1Q9BSM1 259 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 HIF1ANQ9NWT6 349 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 ZNF69Q9UC07 566 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 ZNF107Q9UII5 783 aaPredicted RBP15.89■□□□□ 0.13
USP39-218ENST00000493829 MED13LQ71F56 2210 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 C17orf98A8MV24 154 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 F2RL2O00254 374 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 PLA2G10O15496 165 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 IGHV1-8P0DP01 117 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 TSPAN5P62079 268 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 C11orf91Q3C1V1 193 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 METTL11BQ5VVY1 283 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 DCAF12L2Q5VW00 463 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 HEPN1Q6WQI6 88 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms