RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 C12orf77C9JDV5 145 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 HSD17B6O14756 317 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 TMEM11P17152 192 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 REG1BP48304 166 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 CD83Q01151 205 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 GPR50Q13585 617 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 HNF4GQ14541 408 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 TCTEX1D4Q5JR98 221 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 C10orf99Q6UWK7 81 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 MS4A15Q8N5U1 240 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 OR4F17Q8NGA8 305 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 OR4F4Q96R69 305 aa14.33□□□□□ -0.12
PTPRU-207ENST00000492954 FAM90A10PA6NDY2 464 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 FAM90A7PA6NKC0 464 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 FAM90A23PA8MXZ1 464 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 H0YHG0 523 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 CCRL2O00421 344 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 IGKV1D-33P01593 117 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 IGKV1-33P01594 117 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 FUT3P21217 361 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 SLC35A2P78381 396 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 ZNF816Q0VGE8 651 aaPredicted RBP14.32□□□□□ -0.12
PTPRU-207ENST00000492954 IRF3Q14653 427 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 MED22Q15528 200 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 BEAN1Q3B7T3 259 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 RBM48Q5RL73 367 aaKnown RBP14.32□□□□□ -0.12
PTPRU-207ENST00000492954 SAMD5Q5TGI4 173 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 LRRTM1Q86UE6 522 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 GAPTQ8N292 157 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 PRR18Q8N4B5 295 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 LINC00311Q8N616 119 aa14.32□□□□□ -0.12
PTPRU-207ENST00000492954 IGHV3-72A0A0B4J1Y9 119 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 IGHV1-3A0A0C4DH29 117 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 UBE2QL1A1L167 161 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 SLC31A2O15432 143 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 SPINT2O43291 252 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 SC5DO75845 299 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 HBZP02008 142 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 GAPDHP04406 335 aaKnown RBP14.31□□□□□ -0.12
PTPRU-207ENST00000492954 RCC1P18754 421 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-207ENST00000492954 C6orf183Q5T699 404 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 MOB3BQ86TA1 216 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 C5orf56Q8N8D9 126 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 C8orf31Q8N9H6 132 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 OR10V1Q8NGI7 309 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 OR1L1Q8NH94 360 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 GHRLQ9UBU3 117 aa14.31□□□□□ -0.12
PTPRU-207ENST00000492954 TCRBV4S1A1TA0A5B7 111 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 PDCD6O75340 191 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 MPIG6BO95866 241 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 MYF6P23409 242 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 HSD17B12Q53GQ0 312 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 LIPKQ5VXJ0 399 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 GLT8D1Q68CQ7 371 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 OR10K2Q6IF99 312 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 CEACAM19Q7Z692 300 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 ZNF439Q8NDP4 499 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 OR4X2Q8NGF9 303 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 PHYHIPQ92561 330 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 TMEM203Q969S6 136 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 ST6GALNAC6Q969X2 333 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 CST11Q9H112 138 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 KCNK15Q9H427 330 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 GNG12Q9UBI6 72 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 TPRKBQ9Y3C4 175 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 PLXNB1O43157 2135 aa14.3□□□□□ -0.12
PTPRU-207ENST00000492954 CA11O75493 328 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 GLAP06280 429 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 UBBP0CG47 229 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 VSIG8P0DPA2 414 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 SRMP19623 302 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 Q3ZCU0 254 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 NKAPLQ5M9Q1 402 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 KPRPQ5T749 579 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-207ENST00000492954 SLC25A48Q6ZT89 311 aaKnown RBP14.29□□□□□ -0.12
PTPRU-207ENST00000492954 RTN4IP1Q8WWV3 396 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-207ENST00000492954 UFD1Q92890 307 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 ANKRD60Q9BZ19 345 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 DUSP21Q9H596 190 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 TAF9BQ9HBM6 251 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 RAB9BQ9NP90 201 aa14.29□□□□□ -0.12
PTPRU-207ENST00000492954 TSSC4Q9Y5U2 329 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-207ENST00000492954 FGF16O43320 207 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 UCHL1P09936 223 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 HSMCR30P0CW71 290 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 IL3RAP26951 378 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 CHATP28329 748 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 ZNF134P52741 427 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 EBI3Q14213 229 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 TMEM30BQ3MIR4 351 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 OXLD1Q5BKU9 147 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 CT45A1Q5HYN5 189 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 KHDC1LQ5JSQ8 128 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 C1orf100Q5SVJ3 147 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 TRAT1Q6PIZ9 186 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 C5orf24Q7Z6I8 188 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 ZNF329Q86UD4 541 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 IZUMO1Q8IYV9 350 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 CT45A3Q8NHU0 189 aa14.28□□□□□ -0.12
PTPRU-207ENST00000492954 MRPL30Q8TCC3 161 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms