RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ZNF134P52741 427 aa10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 ZNF137PP52743 207 aa10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 GINS1Q14691 196 aa10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 ZNF660Q6AZW8 331 aaPredicted RBP10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 OR52M1Q8NGK5 317 aa10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 ADAT3Q96EY9 351 aaPredicted RBP10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 NR1H4Q96RI1 486 aaPredicted RBP10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 SLA2Q9H6Q3 261 aa10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 NEK6Q9HC98 313 aa10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 GAB2Q9UQC2 676 aa10.24□□□□□ -0.77
EXOSC3-207ENST00000490516 C13orf42A0A1B0GVH6 325 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 C15orf65H3BRN8 121 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 FCN1O00602 326 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 ATF1P18846 271 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 PRKACBP22694 351 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 PSME3P61289 254 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 ZNF45Q02386 682 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 TMEM267Q0VDI3 215 aaPredicted RBP10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 GUCA2BQ16661 112 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 MICAQ29983 383 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 CD200R1LQ6Q8B3 271 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 PPP1R27Q86WC6 154 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 MAPKAPK5-AS1Q8N8E1 139 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 ZNF439Q8NDP4 499 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 LFNGQ8NES3 379 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 NPBQ8NG41 125 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 CNIH3Q8TBE1 160 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 PP6455Q8WZ26 134 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 ARL11Q969Q4 196 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 RNF183Q96D59 192 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 RDH12Q96NR8 316 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 RAB21Q9UL25 225 aa10.23□□□□□ -0.77
EXOSC3-207ENST00000490516 LOC102724200A0A096LPH7 203 aaPredicted RBP10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 RTL8CO15255 209 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 SPRY2O43597 315 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 MITFO75030 526 aaPredicted RBP10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 NDUFA3O95167 84 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 APOL3O95236 402 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 TRBV12-3P01733 135 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 CSTBP04080 98 aaKnown RBP10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 BMI1P35226 326 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 ALDH3A2P51648 485 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 DEFA5Q01523 94 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 CT45A1Q5HYN5 189 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 CD300LDQ6UXZ3 194 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 TCEANCQ8N8B7 351 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 CT45A3Q8NHU0 189 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 OPALINQ96PE5 141 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 ADI1Q9BV57 179 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 FBXL15Q9H469 300 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 EFCAB1Q9HAE3 211 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 RHOFQ9HBH0 211 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 NDE1Q9NXR1 346 aa10.22□□□□□ -0.77
EXOSC3-207ENST00000490516 LOC107986453A0A1B0GWG9 222 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 LANCL1O43813 399 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 GZMHP20718 246 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 CD40LGP29965 261 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 ACTR3P61158 418 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 PAX5Q02548 391 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 TATDN3Q17R31 274 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 DEFB135Q30KP9 77 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 AKIRIN2Q53H80 203 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 HACD2Q6Y1H2 254 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 WDR89Q96FK6 387 aaPredicted RBP10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 NSMCE2Q96MF7 247 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 ZNF355PQ9NSJ1 428 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 ZNF581Q9P0T4 197 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 RNF150Q9ULK6 438 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 SELENOKQ9Y6D0 94 aa10.21□□□□□ -0.77
EXOSC3-207ENST00000490516 TRIM25Q14258 630 aaKnown RBP10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 RPEL1Q2QD12 228 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 UTS2BQ765I0 119 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 SSX6Q7RTT6 188 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 SLC35F2Q8IXU6 374 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 SAXO1Q8IYX7 474 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 OR10V1Q8NGI7 309 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 CCDC107Q8WV48 283 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 SPSB1Q96BD6 273 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 FGGYQ96C11 551 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 C10orf35Q96D05 121 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 CNN2Q99439 309 aaKnown RBP10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 MRPL20Q9BYC9 149 aaKnown RBP10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 MAGEL2Q9UJ55 1249 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 DHDHQ9UQ10 334 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 TP53TG1Q9Y2A0 90 aa10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 SAMHD1Q9Y3Z3 626 aaKnown RBP10.2□□□□□ -0.78
EXOSC3-207ENST00000490516 ARPC2O15144 300 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 MAGEB3O15480 346 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 OR2A4O95047 310 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 HMGN1P05114 100 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 TMEM225BP0DP42 221 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 EDN2P20800 178 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 NANOS2P60321 138 aaKnown RBP10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 PLGLAQ15195 96 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 DEFB114Q30KQ6 69 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 MOGAT2Q3SYC2 334 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 TMEM236Q5W0B7 351 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 PRSS35Q8N3Z0 413 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 TMEM217Q8N7C4 229 aa10.19□□□□□ -0.78
EXOSC3-207ENST00000490516 GVQW1Q8N7I0 195 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms