RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 A0A1W2PN81 502 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 ARPC1BO15143 372 aaKnown RBP12.39□□□□□ -0.43
DDX56-210ENST00000479440 ORC5O43913 435 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 IGHV3-43DP0DP04 118 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 ARSBP15848 533 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 CHRNA7P36544 502 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 NANOS3P60323 173 aaKnown RBP12.39□□□□□ -0.43
DDX56-210ENST00000479440 RSU1Q15404 277 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 LPCAT4Q643R3 524 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 FDX2Q6P4F2 183 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 KCTD20Q7Z5Y7 419 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 HAPLN4Q86UW8 402 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 SPATA24Q86W54 205 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 ANKRD13BQ86YJ7 626 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 SERPINA12Q8IW75 414 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 TCTEX1D1Q8N7M0 179 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 MINDY2Q8NBR6 621 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 OR5D14Q8NGL3 314 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 TNFAIP8L1Q8WVP5 186 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 RFKQ969G6 155 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 NSL1Q96IY1 281 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 GPER1Q99527 375 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 ZNF251Q9BRH9 671 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 ZNF446Q9NWS9 450 aa12.39□□□□□ -0.43
DDX56-210ENST00000479440 IGHV7-81A0A0B4J1V7 117 aa12.38□□□□□ -0.43
DDX56-210ENST00000479440 SLC31A2O15432 143 aa12.38□□□□□ -0.43
DDX56-210ENST00000479440 MAGEB3O15480 346 aa12.38□□□□□ -0.43
DDX56-210ENST00000479440 MITFO75030 526 aaPredicted RBP12.38□□□□□ -0.43
DDX56-210ENST00000479440 OR7C1O76099 320 aaPredicted RBP12.38□□□□□ -0.43
DDX56-210ENST00000479440 CALB2P22676 271 aa12.38□□□□□ -0.43
DDX56-210ENST00000479440 BLVRBP30043 206 aaPredicted RBP12.38□□□□□ -0.43
DDX56-210ENST00000479440 HAGHQ16775 308 aa12.38□□□□□ -0.43
DDX56-210ENST00000479440 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
DDX56-210ENST00000479440 UBALD1Q8TB05 177 aa12.38□□□□□ -0.43
DDX56-210ENST00000479440 IFT22Q9H7X7 185 aa12.38□□□□□ -0.43
DDX56-210ENST00000479440 KIAA1456Q9P272 454 aa12.38□□□□□ -0.43
DDX56-210ENST00000479440 GNG12Q9UBI6 72 aa12.38□□□□□ -0.43
DDX56-210ENST00000479440 FOXA2Q9Y261 457 aaPredicted RBP12.38□□□□□ -0.43
DDX56-210ENST00000479440 GABRPO00591 440 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 SLC16A6O15403 523 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 NBR2O15453 112 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 LANCL1O43813 399 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 IGLV1-51P01701 117 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 RPSAP08865 295 aaKnown RBP12.37□□□□□ -0.43
DDX56-210ENST00000479440 EPHA2P29317 976 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 ACTBP60709 375 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 PYHIN1Q6K0P9 492 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 LINC00596Q86U02 117 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 OR10K1Q8NGX5 313 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 TPSG1Q9NRR2 321 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 DHDHQ9UQ10 334 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 ST3GAL6Q9Y274 331 aa12.37□□□□□ -0.43
DDX56-210ENST00000479440 DAPL1A0PJW8 107 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 AIPO00170 330 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 SPINT2O43291 252 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 HTR3BO95264 441 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 HSPB1P04792 205 aaKnown RBP12.36□□□□□ -0.43
DDX56-210ENST00000479440 VHLP40337 213 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 CRIP2P52943 208 aaPredicted RBP12.36□□□□□ -0.43
DDX56-210ENST00000479440 RBM11P57052 281 aaKnown RBP12.36□□□□□ -0.43
DDX56-210ENST00000479440 FLOT2Q14254 428 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 NHLRC3Q5JS37 347 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 GTSCR1Q86UQ5 136 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 STX19Q8N4C7 294 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 PARP16Q8N5Y8 322 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 ZNF439Q8NDP4 499 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 NEK7Q8TDX7 302 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 ANKRD60Q9BZ19 345 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 TUBA4BQ9H853 241 aa12.36□□□□□ -0.43
DDX56-210ENST00000479440 OR4C45A6NMZ5 311 aa12.35□□□□□ -0.43
DDX56-210ENST00000479440 RAB3AP20336 220 aa12.35□□□□□ -0.43
DDX56-210ENST00000479440 ALKBH1Q13686 389 aaKnown RBP12.35□□□□□ -0.43
DDX56-210ENST00000479440 MPV17LQ2QL34 196 aa12.35□□□□□ -0.43
DDX56-210ENST00000479440 LIN54Q6MZP7 749 aa12.35□□□□□ -0.43
DDX56-210ENST00000479440 SATL1Q86VE3 508 aa12.35□□□□□ -0.43
DDX56-210ENST00000479440 OR10V1Q8NGI7 309 aa12.35□□□□□ -0.43
DDX56-210ENST00000479440 OR8J1Q8NGP2 316 aa12.35□□□□□ -0.43
DDX56-210ENST00000479440 CCDC107Q8WV48 283 aa12.35□□□□□ -0.43
DDX56-210ENST00000479440 TSEN15Q8WW01 171 aaKnown RBP12.35□□□□□ -0.43
DDX56-210ENST00000479440 RBMXL1Q96E39 390 aaKnown RBP12.35□□□□□ -0.43
DDX56-210ENST00000479440 THTPAQ9BU02 230 aa12.35□□□□□ -0.43
DDX56-210ENST00000479440 PLECQ15149 4684 aaKnown RBP12.34□□□□□ -0.43
DDX56-210ENST00000479440 RBMY1BA6NDE4 496 aaKnown RBP12.34□□□□□ -0.43
DDX56-210ENST00000479440 RBMY1EA6NEQ0 496 aaKnown RBP12.34□□□□□ -0.43
DDX56-210ENST00000479440 C12orf77C9JDV5 145 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 H0Y980 276 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 SLC25A17O43808 307 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 SOX15O60248 233 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 IGHV3-11P01762 117 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 RBMY1DP0C7P1 496 aaKnown RBP12.34□□□□□ -0.43
DDX56-210ENST00000479440 C19orf54Q5BKX5 351 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 CT45A1Q5HYN5 189 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 ATAD3CQ5T2N8 411 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 C6orf183Q5T699 404 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 KDM4DQ6B0I6 523 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 ZNF497Q6ZNH5 498 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 OR52N1Q8NH53 320 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 CT45A3Q8NHU0 189 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 PELI1Q96FA3 418 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms