RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ZNF554Q86TJ5 538 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 CIARTQ8N365 385 aaPredicted RBP4.89□□□□□ -1.63
USP39-213ENST00000467885 Q8N7P7 452 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 WFDC11Q8NEX6 87 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 OR8B3Q8NGG8 313 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 OR1L1Q8NH94 360 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 MRGPRDQ8TDS7 321 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 GIMAP1Q8WWP7 306 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 BORCS5Q969J3 196 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 ARL11Q969Q4 196 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 MRGPRFQ96AM1 343 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 OR8B2Q96RD0 313 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 SLC6A7Q99884 636 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 PIMREGQ9BSJ6 248 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 SSBP3Q9BWW4 388 aaPredicted RBP4.89□□□□□ -1.63
USP39-213ENST00000467885 TINAGL1Q9GZM7 467 aaPredicted RBP4.89□□□□□ -1.63
USP39-213ENST00000467885 TOLLIPQ9H0E2 274 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 HRASLSQ9HDD0 168 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 C12orf4Q9NQ89 552 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 ABCB10Q9NRK6 738 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 TAS2R8Q9NYW2 309 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 OR6C3Q9NZP0 311 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 OPN4Q9UHM6 478 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 TBC1D24Q9ULP9 559 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 UBE2J1Q9Y385 318 aaPredicted RBP4.89□□□□□ -1.63
USP39-213ENST00000467885 LINC00312Q9Y6C7 94 aa4.89□□□□□ -1.63
USP39-213ENST00000467885 PRRC2AP48634 2157 aaKnown RBP4.88□□□□□ -1.63
USP39-213ENST00000467885 ABCA12Q86UK0 2595 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 TRBV23-1A0A0A0MS06 115 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 LINC00854A0A1B0GVQ3 168 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 A0A1W2PQ09 198 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 NKX6-3A6NJ46 265 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 ZNF729A6NN14 1252 aaPredicted RBP4.88□□□□□ -1.63
USP39-213ENST00000467885 A8MXK9 166 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 ZNF736B4DX44 427 aaPredicted RBP4.88□□□□□ -1.63
USP39-213ENST00000467885 M0QYG6 137 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 SDCBPO00560 298 aaPredicted RBP4.88□□□□□ -1.63
USP39-213ENST00000467885 FABP7O15540 132 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 PROP1O75360 226 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 RAB3DO95716 219 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 LIPFP07098 398 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 CTXN2P0C2S0 81 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 AKAIN1P0CW23 69 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 CCL3L1P16619 93 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 RCVRNP35243 200 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 CEACAM6P40199 344 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 ARF6P62330 175 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 GNB2P62879 340 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 LCN2P80188 198 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 HTD2P86397 168 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 ZNF273Q14593 569 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 MORN2Q502X0 79 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 Q5PR19 223 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 LY6G6FQ5SQ64 297 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 VAX1Q5SQQ9 334 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 HEPN1Q6WQI6 88 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 NLRC3Q7RTR2 1065 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 LDLRAD3Q86YD5 345 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 TOMM5Q8N4H5 51 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 DUSP18Q8NEJ0 188 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 OR10A7Q8NGE5 316 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 OR52L2PQ8NGH6 319 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 OR52M1Q8NGK5 317 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 OR4A4PQ8NGN8 299 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 OR56B4Q8NH76 319 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 TERB2Q8NHR7 220 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 UBALD1Q8TB05 177 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 SETD6Q8TBK2 473 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 ZFAND2BQ8WV99 257 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 H1FXQ92522 213 aaKnown RBP4.88□□□□□ -1.63
USP39-213ENST00000467885 TNFRSF14Q92956 283 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 GALMQ96C23 342 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 ANAPC16Q96DE5 110 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 Q96MF0 132 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 TMPRSS13Q9BYE2 586 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 CHMP1AQ9HD42 196 aaPredicted RBP4.88□□□□□ -1.63
USP39-213ENST00000467885 KCNIP1Q9NZI2 227 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 MGAT4AQ9UM21 535 aa4.88□□□□□ -1.63
USP39-213ENST00000467885 A0A087X0M5 115 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 TRGV10A0A0A0MS01 117 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 A0A1B0GX30 115 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 YPEL1O60688 119 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 FOXH1O75593 365 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 TUSC2O75896 110 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 DIRAS3O95661 229 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 CSF1P09603 554 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 OR5H8P0DN80 308 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 TBPP20226 339 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 OMGP23515 440 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 PRTN3P24158 256 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 FPR2P25090 351 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 BTCP35070 178 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 SSTR5P35346 364 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 HRH1P35367 487 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 KIR2DS4P43632 304 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 OR3A3P47888 321 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 TAS2R19P59542 299 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 ACTBP60709 375 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 ACTG1P63261 375 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 MRPS15P82914 257 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms