RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 SMIM19Q96E16 107 aa16.55■□□□□ 0.24
COL9A3-207ENST00000467819 S100A14Q9HCY8 104 aa16.55■□□□□ 0.24
COL9A3-207ENST00000467819 OGG1O15527 345 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 ZNF780AO75290 641 aaPredicted RBP16.54■□□□□ 0.24
COL9A3-207ENST00000467819 MOSP00540 346 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 LALBAP00709 142 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 IGFBP3P17936 291 aaPredicted RBP16.54■□□□□ 0.24
COL9A3-207ENST00000467819 CD1BP29016 333 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 DGCR2P98153 550 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 GPR50Q13585 617 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 CXorf66Q5JRM2 361 aaPredicted RBP16.54■□□□□ 0.24
COL9A3-207ENST00000467819 C10orf67Q8IYJ2 551 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 C8orf31Q8N9H6 132 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 S1PR3Q99500 378 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 RASL11BQ9BPW5 248 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 DCLRE1BQ9H816 532 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 BABAM2Q9NXR7 383 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 TRAPPC2LQ9UL33 140 aa16.54■□□□□ 0.24
COL9A3-207ENST00000467819 C12orf77C9JDV5 145 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 DCTN2Q13561 401 aaKnown RBP16.53■□□□□ 0.24
COL9A3-207ENST00000467819 SYT6Q5T7P8 510 aaPredicted RBP16.53■□□□□ 0.24
COL9A3-207ENST00000467819 PRR18Q8N4B5 295 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 ZFP41Q8N8Y5 198 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 OR10V1Q8NGI7 309 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 OR4K15Q8NH41 348 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 GHSRQ92847 366 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 MUL1Q969V5 352 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 HSPB9Q9BQS6 159 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 GON7Q9BXV9 100 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 PLSCR3Q9NRY6 295 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 GNG12Q9UBI6 72 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 CLEC2DQ9UHP7 191 aa16.53■□□□□ 0.24
COL9A3-207ENST00000467819 TRAV8-7A0A075B6U6 113 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 TRBV5-5A0A0J9YX44 114 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 MCRIP1C9JLW8 97 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 SPINT2O43291 252 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 RRP9O43818 475 aaKnown RBP16.52■□□□□ 0.24
COL9A3-207ENST00000467819 VSIG8P0DPA2 414 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 MYL12AP19105 171 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 LUMP51884 338 aaPredicted RBP16.52■□□□□ 0.24
COL9A3-207ENST00000467819 FOXE3Q13461 319 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 SLC25A48Q6ZT89 311 aaKnown RBP16.52■□□□□ 0.24
COL9A3-207ENST00000467819 JAGN1Q8N5M9 183 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 OR8U1Q8NH10 309 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 SMPD3Q9NY59 655 aaPredicted RBP16.52■□□□□ 0.24
COL9A3-207ENST00000467819 ETAA1Q9NY74 926 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 CKLFQ9UBR5 152 aa16.52■□□□□ 0.24
COL9A3-207ENST00000467819 ZMAT5Q9UDW3 170 aaKnown RBP16.52■□□□□ 0.24
COL9A3-207ENST00000467819 MRPS28Q9Y2Q9 187 aaKnown RBP16.52■□□□□ 0.24
COL9A3-207ENST00000467819 EXOSC1Q9Y3B2 195 aaKnown RBP16.52■□□□□ 0.24
COL9A3-207ENST00000467819 IRGMA1A4Y4 181 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 F2RL1P55085 397 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 GPR176Q14439 515 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 Q3ZCU0 254 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 Q499Y3 187 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 DMKNQ6E0U4 476 aaPredicted RBP16.51■□□□□ 0.23
COL9A3-207ENST00000467819 GLIPR1L1Q6UWM5 242 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 ZNF439Q8NDP4 499 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 OR5M8Q8NGP6 311 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 OR1L1Q8NH94 360 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 WWC2-AS2Q96NR7 200 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 SPACA1Q9HBV2 294 aa16.51■□□□□ 0.23
COL9A3-207ENST00000467819 RCC2Q9P258 522 aaKnown RBP16.51■□□□□ 0.23
COL9A3-207ENST00000467819 DIMT1Q9UNQ2 313 aaKnown RBP16.51■□□□□ 0.23
COL9A3-207ENST00000467819 A0A1W2PPK0 400 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 TXNL1O43396 289 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 BAG2O95816 211 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 HBZP02008 142 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 ELANEP08246 267 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 VDAC1P21796 283 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 ZNF134P52741 427 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 GP2P55259 537 aaKnown RBP16.5■□□□□ 0.23
COL9A3-207ENST00000467819 CT45A1Q5HYN5 189 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 C6orf183Q5T699 404 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 RAB12Q6IQ22 244 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 FAM71E2Q8N5Q1 922 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 OR8H1Q8NGG4 311 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 CT45A3Q8NHU0 189 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 OR14A2Q96R54 314 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 BANF2Q9H503 90 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 RAB9BQ9NP90 201 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 PEX16Q9Y5Y5 336 aa16.5■□□□□ 0.23
COL9A3-207ENST00000467819 PNMA8CA0A1B0GUJ8 204 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 RAMP3O60896 148 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 GPX5O75715 221 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 FSTP19883 344 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 MYF6P23409 242 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 SOX6P35712 828 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 CDX1P47902 265 aaPredicted RBP16.49■□□□□ 0.23
COL9A3-207ENST00000467819 ZNF137PP52743 207 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 RPS11P62280 158 aaKnown RBP eCLIP16.49■□□□□ 0.23
COL9A3-207ENST00000467819 KIR2DS1Q14954 304 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 YIF1BQ5BJH7 314 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 AWAT2Q6E213 333 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 RNF152Q8N8N0 203 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 CYYR1Q96J86 154 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 PGLYRP3Q96LB9 341 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 RDH12Q96NR8 316 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 PRR25Q96S07 402 aa16.49■□□□□ 0.23
COL9A3-207ENST00000467819 CHCHD3Q9NX63 227 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms