RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 FAM46BQ96A09 425 aa15.06■□□□□ 0
COL5A1-203ENST00000460264 CYYR1Q96J86 154 aa15.06■□□□□ 0
COL5A1-203ENST00000460264 IGHV3-43A0A0B4J1X8 118 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 H0YHG0 523 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 SC5DO75845 299 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 IGHV3-43DP0DP04 118 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 FUT3P21217 361 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 MYF6P23409 242 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 CD83Q01151 205 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 ZNF816Q0VGE8 651 aaPredicted RBP15.05■□□□□ -0
COL5A1-203ENST00000460264 SYT6Q5T7P8 510 aaPredicted RBP15.05■□□□□ -0
COL5A1-203ENST00000460264 LINC00311Q8N616 119 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 OR4K15Q8NH41 348 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 ANKRD60Q9BZ19 345 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 CST11Q9H112 138 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 GHRLQ9UBU3 117 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 TRAPPC2LQ9UL33 140 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 TPRKBQ9Y3C4 175 aa15.05■□□□□ -0
COL5A1-203ENST00000460264 CCRL2O00421 344 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 CA11O75493 328 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 GLAP06280 429 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 HES1Q14469 280 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 TMEM30BQ3MIR4 351 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 TCTEX1D4Q5JR98 221 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 RBM48Q5RL73 367 aaKnown RBP15.04■□□□□ -0
COL5A1-203ENST00000460264 C1orf100Q5SVJ3 147 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 C6orf183Q5T699 404 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 CENPVQ7Z7K6 275 aaPredicted RBP15.04■□□□□ -0
COL5A1-203ENST00000460264 OR4F17Q8NGA8 305 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 R3HDM4Q96D70 268 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 OR4F4Q96R69 305 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 DUSP21Q9H596 190 aa15.04■□□□□ -0
COL5A1-203ENST00000460264 NOTCH3Q9UM47 2321 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 IGHV1-3A0A0C4DH29 117 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 G3V4G9 280 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 SPINT2O43291 252 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 PDCD6O75340 191 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 MPIG6BO95866 241 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 IGKV1D-33P01593 117 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 IGKV1-33P01594 117 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 HBZP02008 142 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 GAPDHP04406 335 aaKnown RBP15.03■□□□□ -0
COL5A1-203ENST00000460264 UBBP0CG47 229 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 TMEM11P17152 192 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 RCC1P18754 421 aaPredicted RBP15.03■□□□□ -0
COL5A1-203ENST00000460264 REG1BP48304 166 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 Q3ZCU0 254 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 C9orf152Q5JTZ5 239 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 LIPKQ5VXJ0 399 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 GLT8D1Q68CQ7 371 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 TRAT1Q6PIZ9 186 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 CEACAM19Q7Z692 300 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 C5orf56Q8N8D9 126 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 OR1L1Q8NH94 360 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 UFD1Q92890 307 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 RAB9BQ9NP90 201 aa15.03■□□□□ -0
COL5A1-203ENST00000460264 A0A1W2PRX2 142 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 UBE2QL1A1L167 161 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 SLC31A2O15432 143 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 RGS10O43665 173 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 UCHL1P09936 223 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 VSIG8P0DPA2 414 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 IL3RAP26951 378 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 HNF4GQ14541 408 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 BEAN1Q3B7T3 259 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 HSD17B12Q53GQ0 312 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 SAMD5Q5TGI4 173 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 C10orf99Q6UWK7 81 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 MOB3BQ86TA1 216 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 IZUMO1Q8IYV9 350 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 PRR18Q8N4B5 295 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 ZNF439Q8NDP4 499 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 ST6GALNAC6Q969X2 333 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 MBNL3Q9NUK0 354 aaKnown RBP15.02■□□□□ -0
COL5A1-203ENST00000460264 GNG12Q9UBI6 72 aa15.02■□□□□ -0
COL5A1-203ENST00000460264 PRKDCP78527 4128 aaKnown RBP15.02□□□□□ -0.01
COL5A1-203ENST00000460264 IGHV3-72A0A0B4J1Y9 119 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 FGF16O43320 207 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 SRMP19623 302 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 CRHBPP24387 322 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 RPS27AP62979 156 aaKnown RBP15.01□□□□□ -0.01
COL5A1-203ENST00000460264 TPBGQ13641 420 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 EBI3Q14213 229 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 OR10K2Q6IF99 312 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 SLC25A48Q6ZT89 311 aaKnown RBP15.01□□□□□ -0.01
COL5A1-203ENST00000460264 OR4X2Q8NGF9 303 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 RTN4IP1Q8WWV3 396 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-203ENST00000460264 TMEM203Q969S6 136 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 VCX3BQ9H321 246 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 TAF9BQ9HBM6 251 aa15.01□□□□□ -0.01
COL5A1-203ENST00000460264 TCRBV4S1A1TA0A5B7 111 aa15□□□□□ -0.01
COL5A1-203ENST00000460264 SLC22A1O15245 554 aa15□□□□□ -0.01
COL5A1-203ENST00000460264 HSMCR30P0CW71 290 aa15□□□□□ -0.01
COL5A1-203ENST00000460264 CD37P11049 281 aa15□□□□□ -0.01
COL5A1-203ENST00000460264 CHATP28329 748 aa15□□□□□ -0.01
COL5A1-203ENST00000460264 ZNF137PP52743 207 aa15□□□□□ -0.01
COL5A1-203ENST00000460264 UNC119Q13432 240 aa15□□□□□ -0.01
COL5A1-203ENST00000460264 NKAPLQ5M9Q1 402 aa15□□□□□ -0.01
COL5A1-203ENST00000460264 KPRPQ5T749 579 aaPredicted RBP15□□□□□ -0.01
COL5A1-203ENST00000460264 IZUMO2Q6UXV1 221 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms