RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 HNF4GQ14541 408 aa16.01■□□□□ 0.15
LRCH3-208ENST00000443727 FAM27D1Q5T7N8 215 aa16.01■□□□□ 0.15
LRCH3-208ENST00000443727 GLT8D1Q68CQ7 371 aa16.01■□□□□ 0.15
LRCH3-208ENST00000443727 CEACAM19Q7Z692 300 aa16.01■□□□□ 0.15
LRCH3-208ENST00000443727 MOB3BQ86TA1 216 aa16.01■□□□□ 0.15
LRCH3-208ENST00000443727 PRR18Q8N4B5 295 aa16.01■□□□□ 0.15
LRCH3-208ENST00000443727 WIPF2Q8TF74 440 aaPredicted RBP16.01■□□□□ 0.15
LRCH3-208ENST00000443727 SGCDQ92629 289 aa16.01■□□□□ 0.15
LRCH3-208ENST00000443727 UFD1Q92890 307 aa16.01■□□□□ 0.15
LRCH3-208ENST00000443727 GFOD1Q9NXC2 390 aa16.01■□□□□ 0.15
LRCH3-208ENST00000443727 GNG12Q9UBI6 72 aa16.01■□□□□ 0.15
LRCH3-208ENST00000443727 A0A1W2PRX2 142 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 UBE2QL1A1L167 161 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 FAM90A9PA6NNJ1 464 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 C12orf77C9JDV5 145 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 MPIG6BO95866 241 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 GAPDHP04406 335 aaKnown RBP16■□□□□ 0.15
LRCH3-208ENST00000443727 UBBP0CG47 229 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 HSMCR30P0CW71 290 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 REG1BP48304 166 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 HSD17B12Q53GQ0 312 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 UNQ9370/PRO34162Q6UXP9 181 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 LYPD6Q86Y78 171 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 PHYHIPQ92561 330 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 Q96M66 194 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 CCDC90BQ9GZT6 254 aa16■□□□□ 0.15
LRCH3-208ENST00000443727 LSM2Q9Y333 95 aaKnown RBP16■□□□□ 0.15
LRCH3-208ENST00000443727 RGS10O43665 173 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 CA11O75493 328 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 IGKV1D-33P01593 117 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 IGKV1-33P01594 117 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 AMY1AP04745 511 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 AMY2AP04746 511 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 GLAP06280 429 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 SRMP19623 302 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 MYF6P23409 242 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 LOXL3P58215 753 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 SLC35A2P78381 396 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 NKAPLQ5M9Q1 402 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 LIPKQ5VXJ0 399 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 TRAT1Q6PIZ9 186 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 TMEM203Q969S6 136 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 KCNIP1Q9NZI2 227 aa15.99■□□□□ 0.15
LRCH3-208ENST00000443727 TCRBV4S1A1TA0A5B7 111 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 ERICH4A6NGS2 130 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 PDCD6O75340 191 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 ZNF816Q0VGE8 651 aaPredicted RBP15.98■□□□□ 0.15
LRCH3-208ENST00000443727 TMEM30BQ3MIR4 351 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 LRRTM1Q86UE6 522 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 LINC00311Q8N616 119 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 C8orf31Q8N9H6 132 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 OR4X2Q8NGF9 303 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 OR10V1Q8NGI7 309 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 OR1L1Q8NH94 360 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 NEDD4LQ96PU5 975 aa15.98■□□□□ 0.15
LRCH3-208ENST00000443727 IGHV1-3A0A0C4DH29 117 aa15.97■□□□□ 0.15
LRCH3-208ENST00000443727 G3V4G9 280 aa15.97■□□□□ 0.15
LRCH3-208ENST00000443727 HBZP02008 142 aa15.97■□□□□ 0.15
LRCH3-208ENST00000443727 RCC1P18754 421 aaPredicted RBP15.97■□□□□ 0.15
LRCH3-208ENST00000443727 GP2P55259 537 aaKnown RBP15.97■□□□□ 0.15
LRCH3-208ENST00000443727 CD83Q01151 205 aa15.97■□□□□ 0.15
LRCH3-208ENST00000443727 IRF3Q14653 427 aa15.97■□□□□ 0.15
LRCH3-208ENST00000443727 KHDC1LQ5JSQ8 128 aa15.97■□□□□ 0.15
LRCH3-208ENST00000443727 FAM53AQ6NSI3 398 aaPredicted RBP15.97■□□□□ 0.15
LRCH3-208ENST00000443727 ANKRD60Q9BZ19 345 aa15.97■□□□□ 0.15
LRCH3-208ENST00000443727 DUSP21Q9H596 190 aa15.97■□□□□ 0.15
LRCH3-208ENST00000443727 IGHV3-72A0A0B4J1Y9 119 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 ADARB2-AS1A8MUL3 147 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 SC5DO75845 299 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 PF4V1P10720 104 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 HTR2CP28335 458 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 HSPA13P48723 471 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 Q3ZCU0 254 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 SIGIRRQ6IA17 410 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 OR10K2Q6IF99 312 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 IZUMO2Q6UXV1 221 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 GAPTQ8N292 157 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 KCNG3Q8TAE7 436 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 TMEM59Q9BXS4 323 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 TAF9BQ9HBM6 251 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 OR2S2Q9NQN1 319 aa15.96■□□□□ 0.15
LRCH3-208ENST00000443727 TSSC4Q9Y5U2 329 aaPredicted RBP15.96■□□□□ 0.15
LRCH3-208ENST00000443727 NCBP2LA6PVI3 153 aaKnown RBP15.95■□□□□ 0.14
LRCH3-208ENST00000443727 FGF16O43320 207 aa15.95■□□□□ 0.14
LRCH3-208ENST00000443727 UCHL1P09936 223 aa15.95■□□□□ 0.14
LRCH3-208ENST00000443727 VSIG8P0DPA2 414 aa15.95■□□□□ 0.14
LRCH3-208ENST00000443727 C1orf100Q5SVJ3 147 aa15.95■□□□□ 0.14
LRCH3-208ENST00000443727 C5orf56Q8N8D9 126 aa15.95■□□□□ 0.14
LRCH3-208ENST00000443727 OR2T10Q8NGZ9 312 aa15.95■□□□□ 0.14
LRCH3-208ENST00000443727 RTN4IP1Q8WWV3 396 aaPredicted RBP15.95■□□□□ 0.14
LRCH3-208ENST00000443727 PSMB11A5LHX3 300 aa15.94■□□□□ 0.14
LRCH3-208ENST00000443727 SERPINE3A8MV23 424 aa15.94■□□□□ 0.14
LRCH3-208ENST00000443727 SLC31A2O15432 143 aa15.94■□□□□ 0.14
LRCH3-208ENST00000443727 RPS27AP62979 156 aaKnown RBP15.94■□□□□ 0.14
LRCH3-208ENST00000443727 TRAM1Q15629 374 aa15.94■□□□□ 0.14
LRCH3-208ENST00000443727 TCTEX1D4Q5JR98 221 aa15.94■□□□□ 0.14
LRCH3-208ENST00000443727 SLC25A48Q6ZT89 311 aaKnown RBP15.94■□□□□ 0.14
LRCH3-208ENST00000443727 TGIF2LXQ8IUE1 241 aa15.94■□□□□ 0.14
LRCH3-208ENST00000443727 OR6M1Q8NGM8 313 aa15.94■□□□□ 0.14
LRCH3-208ENST00000443727 EAF1Q96JC9 268 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms