RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 MARCH5Q9NX47 278 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 TAS2R8Q9NYW2 309 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 C1RLQ9NZP8 487 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 FLRT3Q9NZU0 649 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 FLRT1Q9NZU1 646 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 MRPS16Q9Y3D3 137 aaKnown RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 SCN4AP35499 1836 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 CEP290O15078 2479 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 LAMA2P24043 3122 aaKnown RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 PRUNE2Q8WUY3 3088 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 IGKV6D-41A0A0C4DH26 115 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 A0A0D9SG52 128 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 A0A1W2PPK0 400 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 H3BTX0 84 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 SAP18O00422 153 aaKnown RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 MFNGO00587 321 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 NME4O00746 187 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 TAPBPO15533 448 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF207O43670 478 aaKnown RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 FGF17O60258 216 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 PRKNO60260 465 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 MPDU1O75352 247 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 DIRAS1O95057 198 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 PFN1P07737 140 aaKnown RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 SP1P08047 785 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 SP9P0CG40 484 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 GATA1P15976 413 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 EPCAMP16422 314 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ATF1P18846 271 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 BLVRBP30043 206 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR3A2P47893 321 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 LHX2P50458 406 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 SLC35A1P78382 337 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ARG2P78540 354 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 TMEM267Q0VDI3 215 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 PPP1R1AQ13522 171 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 MEF2DQ14814 521 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 GUSBP1Q15486 140 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 UBE2V2Q15819 145 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 FFAR4Q5NUL3 377 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 C1orf195Q5TG92 126 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 FAM90A2PQ658T7 463 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 GRHL2Q6ISB3 625 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 TRIM40Q6P9F5 258 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 GLIPR1L1Q6UWM5 242 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 TMEM184AQ6ZMB5 413 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF66Q6ZN08 573 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 PRSS45Q7RTY3 260 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 MOB3BQ86TA1 216 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 DTX2Q86UW9 622 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 CHSY1Q86X52 802 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF740Q8NDX6 193 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ACVR1CQ8NER5 493 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR11G2Q8NGC1 345 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR5AP2Q8NGF4 316 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR1B1Q8NGR6 318 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR2K2Q8NGT1 345 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF564Q8TBZ8 553 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 RDH11Q8TC12 318 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 THEM6Q8WUY1 208 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 SECTM1Q8WVN6 248 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR5P3Q8WZ94 311 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 DDB2Q92466 427 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 RDH5Q92781 318 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 BADQ92934 168 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF419Q96HQ0 510 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 TMEM101Q96IK0 257 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 CIB3Q96Q77 187 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2AAQ96QV6 131 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR4K3Q96R72 315 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ADAT1Q9BUB4 502 aaKnown RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 DERL1Q9BUN8 251 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 CHIAQ9BZP6 476 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 C11orf54Q9H0W9 315 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 PRO3102Q9H379 93 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 TBC1D17Q9HA65 648 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 CDH20Q9HBT6 801 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 SLC25A19Q9HC21 320 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 RETNQ9HD89 108 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 MMP26Q9NRE1 261 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 MRPS18AQ9NVS2 196 aaKnown RBP3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 TMEM45AQ9NWC5 275 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 IL36GQ9NZH8 169 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 FAM30AQ9NZY2 134 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 THYN1Q9P016 225 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 KCNE5Q9UJ90 142 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 PRNDQ9UKY0 176 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 VDAC3Q9Y277 283 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 RAI2Q9Y5P3 530 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF780BQ9Y6R6 833 aa3.98□□□□□ -1.77
HMGB3P9-201ENST00000441799 MYH14Q7Z406 1995 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 SMIM35A0A1B0GVV1 85 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 hADV38S2A0JD32 116 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF705GA8MUZ8 300 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 B4DEV8 164 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 MCRIP1C9JLW8 97 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 K7EPK0 472 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms