RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 OR4K15Q8NH41 348 aa12.89□□□□□ -0.35
SNHG17-205ENST00000424235 FCGR1BQ92637 280 aa12.89□□□□□ -0.35
SNHG17-205ENST00000424235 MRPS24Q96EL2 167 aaKnown RBP12.89□□□□□ -0.35
SNHG17-205ENST00000424235 CST11Q9H112 138 aa12.89□□□□□ -0.35
SNHG17-205ENST00000424235 IFT22Q9H7X7 185 aa12.89□□□□□ -0.35
SNHG17-205ENST00000424235 ACOT13Q9NPJ3 140 aa12.89□□□□□ -0.35
SNHG17-205ENST00000424235 TCRBV4S1A1TA0A5B7 111 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 UBE2QL1A1L167 161 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 GPX5O75715 221 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 MPIG6BO95866 241 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 OPN1MWP04001 364 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 OPN1MW2P0DN77 364 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 OPN1MW3P0DN78 364 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 ACSM3Q53FZ2 586 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 SYT6Q5T7P8 510 aaPredicted RBP12.88□□□□□ -0.35
SNHG17-205ENST00000424235 OR10V1Q8NGI7 309 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 UFD1Q92890 307 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 KCNIP1Q9NZI2 227 aa12.88□□□□□ -0.35
SNHG17-205ENST00000424235 WNK1Q9H4A3 2382 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 IGHV3-72A0A0B4J1Y9 119 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 NCBP2LA6PVI3 153 aaKnown RBP12.87□□□□□ -0.35
SNHG17-205ENST00000424235 NPIPB11E5RHQ5 1161 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 IGKV1D-33P01593 117 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 IGKV1-33P01594 117 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 PF4P02776 101 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 INSL4Q14641 139 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 SPHARQ15513 63 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 HSD17B12Q53GQ0 312 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 GLT8D1Q68CQ7 371 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 ZNF497Q6ZNH5 498 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 SLC16A12Q6ZSM3 486 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 ZNF367Q7RTV3 350 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 OR8H3Q8N146 312 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 MS4A15Q8N5U1 240 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 NEDD4LQ96PU5 975 aa12.87□□□□□ -0.35
SNHG17-205ENST00000424235 LY6LH3BQJ8 138 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 PIN1P1O15428 100 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 MT-ND4P03905 459 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 GAPDHP04406 335 aaKnown RBP12.86□□□□□ -0.35
SNHG17-205ENST00000424235 CGB3P0DN86 165 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 CGB7P0DN87 165 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 PAX5Q02548 391 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 DIAPH2-AS1Q14236 149 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 FAM27D1Q5T7N8 215 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 CEACAM19Q7Z692 300 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 CDH26Q8IXH8 852 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 TMEM104Q8NE00 496 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 TMEM203Q969S6 136 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 UQCC2Q9BRT2 126 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 CHMP1AQ9HD42 196 aaPredicted RBP12.86□□□□□ -0.35
SNHG17-205ENST00000424235 GFOD1Q9NXC2 390 aa12.86□□□□□ -0.35
SNHG17-205ENST00000424235 A0A1W2PPI3 338 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 G3V4G9 280 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 ORC5O43913 435 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 TFAP2AP05549 437 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 CD1AP06126 327 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 UBBP0CG47 229 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 CD33P20138 364 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 FUT3P21217 361 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 PSMB9P28065 219 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 RPL5P46777 297 aaKnown RBP12.85□□□□□ -0.35
SNHG17-205ENST00000424235 FBLN7Q53RD9 439 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 UBE2UQ5VVX9 321 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 LIPKQ5VXJ0 399 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 TRAT1Q6PIZ9 186 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 SETD6Q8TBK2 473 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 OCSTAMPQ9BR26 566 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 WNT10AQ9GZT5 417 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 LINC00574Q9H8X3 128 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 PLGRKTQ9HBL7 147 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 GHRLQ9UBU3 117 aa12.85□□□□□ -0.35
SNHG17-205ENST00000424235 PSMB11A5LHX3 300 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A10PA6NDY2 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A18PA6NE21 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A16PA6NEW6 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A20PA6NIJ5 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A7PA6NKC0 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 SERPINE3A8MV23 424 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A12PA8MX19 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A5PA8MXJ8 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A23PA8MXZ1 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 C12orf77C9JDV5 145 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 C15orf65H3BRN8 121 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 PDCD6O75340 191 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 HBZP02008 142 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A15PP0C7V4 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A13PP0C7W8 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A14PP0C7W9 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 FAM90A24PP0C7X0 464 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 THNSL2Q86YJ6 484 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 OR52M1Q8NGK5 317 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 OR1L1Q8NH94 360 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 Q96M66 194 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 TMEM59Q9BXS4 323 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 OR2S2Q9NQN1 319 aa12.84□□□□□ -0.35
SNHG17-205ENST00000424235 RCC2Q9P258 522 aaKnown RBP12.84□□□□□ -0.35
SNHG17-205ENST00000424235 LSM2Q9Y333 95 aaKnown RBP12.84□□□□□ -0.35
SNHG17-205ENST00000424235 TSSC4Q9Y5U2 329 aaPredicted RBP12.84□□□□□ -0.35
SNHG17-205ENST00000424235 IGHV1-3A0A0C4DH29 117 aa12.83□□□□□ -0.36
SNHG17-205ENST00000424235 ALDH3B2P48448 385 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms