RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 CRLF2Q9HC73 371 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 ASCL3Q9NQ33 180 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 CCL28Q9NRJ3 127 aa12.28□□□□□ -0.44
MSH5-206ENST00000423982 ANKRD11Q6UB99 2663 aaPredicted RBP12.28□□□□□ -0.44
MSH5-206ENST00000423982 PCSK5Q92824 1860 aa12.27□□□□□ -0.44
MSH5-206ENST00000423982 LOC102723996A0A087X1L8 192 aa12.27□□□□□ -0.44
MSH5-206ENST00000423982 LOC102725191A0A1B0GVB3 256 aa12.27□□□□□ -0.44
MSH5-206ENST00000423982 ZNF732B4DXR9 585 aa12.27□□□□□ -0.44
MSH5-206ENST00000423982 GTF3AQ92664 365 aaKnown RBP12.27□□□□□ -0.44
MSH5-206ENST00000423982 DSPP15924 2871 aaKnown RBP12.27□□□□□ -0.45
MSH5-206ENST00000423982 PIEZO2Q9H5I5 2752 aa12.27□□□□□ -0.45
MSH5-206ENST00000423982 CCL3P10147 92 aa12.27□□□□□ -0.45
MSH5-206ENST00000423982 DDTP30046 118 aa12.27□□□□□ -0.45
MSH5-206ENST00000423982 RBM11P57052 281 aaKnown RBP12.27□□□□□ -0.45
MSH5-206ENST00000423982 SSPNQ14714 243 aa12.27□□□□□ -0.45
MSH5-206ENST00000423982 HERPUD1Q15011 391 aa12.27□□□□□ -0.45
MSH5-206ENST00000423982 FOXL2NBQ6ZUU3 175 aa12.27□□□□□ -0.45
MSH5-206ENST00000423982 PACRGQ96M98 296 aaPredicted RBP12.27□□□□□ -0.45
MSH5-206ENST00000423982 SLC25A31Q9H0C2 315 aa12.27□□□□□ -0.45
MSH5-206ENST00000423982 A0A087X0M5 115 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 A0A0J9YW62 118 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 LOC102723971A0A1B0GUV8 181 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 A0A1B0GX30 115 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 LIFP15018 202 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 CLEC12BQ2HXU8 276 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 NMSQ5H8A3 153 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 FAM27BQ5VT28 67 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 WDR25Q64LD2 544 aaPredicted RBP12.26□□□□□ -0.45
MSH5-206ENST00000423982 ASCL4Q6XD76 172 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 LHFPL2Q6ZUX7 228 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 TMPRSS7Q7RTY8 843 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 ZNF611Q8N823 705 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 OR1F12Q8NHA8 337 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 C10orf35Q96D05 121 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 TMEM56Q96MV1 263 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 HIST1H2BLQ99880 126 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 RPRMQ9NS64 109 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 UFSP2Q9NUQ7 469 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 CRIM1Q9NZV1 1036 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 TAAR3PQ9P1P4 343 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 TMEM56-RWDD3S4R434 201 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 BTBD17A6NE02 478 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 IL2RGP31785 369 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 SLC35E3Q7Z769 313 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 ZNF295-AS1Q8N0V1 137 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 EXTL1Q92935 676 aa12.26□□□□□ -0.45
MSH5-206ENST00000423982 DOCK10Q96BY6 2186 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 PTBP3O95758 552 aaKnown RBP12.25□□□□□ -0.45
MSH5-206ENST00000423982 ID3Q02535 119 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 ZNF726P1Q15940 193 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 EXT1Q16394 746 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 NECAP1Q8NC96 275 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 SIRT7Q9NRC8 400 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 FREM1Q5H8C1 2179 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 SLC22A20A6NK97 555 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 PHOX2AO14813 284 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 ZIC3O60481 467 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 WT1P19544 449 aaPredicted RBP12.25□□□□□ -0.45
MSH5-206ENST00000423982 TLE4Q04727 773 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 RAB35Q15286 201 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 SLC25A24Q6NUK1 477 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 OR8G5Q8NG78 346 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 THOC3Q96J01 351 aaKnown RBP12.25□□□□□ -0.45
MSH5-206ENST00000423982 RNF115Q9Y4L5 304 aa12.25□□□□□ -0.45
MSH5-206ENST00000423982 IGKV1-6A0A0C4DH72 117 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 C21orf140B9A014 251 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 NKX2-8O15522 239 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 IGHV3-9P01782 118 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 BCL3P20749 454 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 TAS2R30P59541 319 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 PSG4Q00888 419 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 TMEM42Q69YG0 159 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 C1orf87Q8N0U7 546 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 GNPNAT1Q96EK6 184 aaPredicted RBP12.24□□□□□ -0.45
MSH5-206ENST00000423982 ATP5SQ99766 215 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 KIAA1549Q9HCM3 1950 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 SNRPCP09234 159 aaKnown RBP12.24□□□□□ -0.45
MSH5-206ENST00000423982 MRPS34P82930 218 aaKnown RBP12.24□□□□□ -0.45
MSH5-206ENST00000423982 REC114Q7Z4M0 266 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 RPS19BP1Q86WX3 136 aaKnown RBP12.24□□□□□ -0.45
MSH5-206ENST00000423982 OR51H1Q8NH63 302 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 MISP3Q96FF7 219 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 GPR87Q9BY21 358 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 A0A1B0GU03 582 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 hCG_38984A0A1B0GV85 526 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 ARL16Q0P5N6 197 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 TMEM211Q6ICI0 200 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 Q6ZRM9 215 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 LINC00696Q6ZRV3 163 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 BEND4Q6ZU67 534 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 RBMXL1Q96E39 390 aaKnown RBP12.24□□□□□ -0.45
MSH5-206ENST00000423982 SPIN2AQ99865 258 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 SPIN2BQ9BPZ2 258 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 PROK2Q9HC23 129 aa12.24□□□□□ -0.45
MSH5-206ENST00000423982 ARGFXA6NJG6 315 aa12.23□□□□□ -0.45
MSH5-206ENST00000423982 HMGB3O15347 200 aaKnown RBP12.23□□□□□ -0.45
MSH5-206ENST00000423982 IAPPP10997 89 aa12.23□□□□□ -0.45
MSH5-206ENST00000423982 NR2C1P13056 603 aa12.23□□□□□ -0.45
MSH5-206ENST00000423982 EDN3P14138 238 aa12.23□□□□□ -0.45
MSH5-206ENST00000423982 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms