RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 RGS10O43665 173 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 PEX14O75381 377 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 LPLP06858 475 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 SNRNP70P08621 437 aaKnown RBP14.1□□□□□ -0.15
LSM5-204ENST00000409909 UCHL1P09936 223 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 IGHV3-43DP0DP04 118 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 RCC1P18754 421 aaPredicted RBP14.1□□□□□ -0.15
LSM5-204ENST00000409909 CRHBPP24387 322 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 TPBGQ13641 420 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 NSUN5P1Q3KNT7 163 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 RBM48Q5RL73 367 aaKnown RBP14.1□□□□□ -0.15
LSM5-204ENST00000409909 C1orf100Q5SVJ3 147 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 OR10K2Q6IF99 312 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 IZUMO2Q6UXV1 221 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 TMEM91Q6ZNR0 172 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 GHRLQ9UBU3 117 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 TRAPPC2LQ9UL33 140 aa14.1□□□□□ -0.15
LSM5-204ENST00000409909 NOTCH3Q9UM47 2321 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 GLAP06280 429 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 HSMCR30P0CW71 290 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 VSIG8P0DPA2 414 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 MAP2K4P45985 399 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 RAB7AP51149 207 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 HSD17B12Q53GQ0 312 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 GLT8D1Q68CQ7 371 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 C5orf24Q7Z6I8 188 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 OR8H3Q8N146 312 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 LINC00311Q8N616 119 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 C8orf31Q8N9H6 132 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 UFD1Q92890 307 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 VCX3BQ9H321 246 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 KCNK15Q9H427 330 aa14.09□□□□□ -0.15
LSM5-204ENST00000409909 HSD17B6O14756 317 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 SLC31A2O15432 143 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 PDCD6O75340 191 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 MPIG6BO95866 241 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 OPN1MWP04001 364 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 UBBP0CG47 229 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 OPN1MW2P0DN77 364 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 OPN1MW3P0DN78 364 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 REG1BP48304 166 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 ZNF134P52741 427 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 RPS25P62851 125 aaKnown RBP14.08□□□□□ -0.16
LSM5-204ENST00000409909 QRFPP83859 136 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 ZNF816Q0VGE8 651 aaPredicted RBP14.08□□□□□ -0.16
LSM5-204ENST00000409909 HNF4GQ14541 408 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 TCTEX1D4Q5JR98 221 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 PRSS48Q7RTY5 328 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 NDUFA11Q86Y39 141 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 C1QL4Q86Z23 238 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 ZNF439Q8NDP4 499 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 OR5AU1Q8NGC0 362 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 OR1L1Q8NH94 360 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 ST6GALNAC6Q969X2 333 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 GFI1Q99684 422 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 CCDC90BQ9GZT6 254 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 CST11Q9H112 138 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 ISYNA1Q9NPH2 558 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 PLXNB1O43157 2135 aa14.08□□□□□ -0.16
LSM5-204ENST00000409909 IGHV1-3A0A0C4DH29 117 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 M0QZK8 103 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 CCRL2O00421 344 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 SLC22A1O15245 554 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 SPINT2O43291 252 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 CA11O75493 328 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 HBZP02008 142 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 CPEP16870 476 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 RPS27AP62979 156 aaKnown RBP14.07□□□□□ -0.16
LSM5-204ENST00000409909 CD83Q01151 205 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 UNC119Q13432 240 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 PDLIM3Q53GG5 364 aaPredicted RBP14.07□□□□□ -0.16
LSM5-204ENST00000409909 C6orf183Q5T699 404 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 CENPVQ7Z7K6 275 aaPredicted RBP14.07□□□□□ -0.16
LSM5-204ENST00000409909 PRR18Q8N4B5 295 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 MRPL30Q8TCC3 161 aaKnown RBP14.07□□□□□ -0.16
LSM5-204ENST00000409909 CNBD2Q96M20 576 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 SULT4A1Q9BR01 284 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 MBNL3Q9NUK0 354 aaKnown RBP14.07□□□□□ -0.16
LSM5-204ENST00000409909 MOB4Q9Y3A3 225 aa14.07□□□□□ -0.16
LSM5-204ENST00000409909 IGHV3-72A0A0B4J1Y9 119 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 IGKV1D-33P01593 117 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 IGKV1-33P01594 117 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 GAPDHP04406 335 aaKnown RBP14.06□□□□□ -0.16
LSM5-204ENST00000409909 TMEM11P17152 192 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 CHATP28329 748 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 HTR2CP28335 458 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 HSPA13P48723 471 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 EMX1Q04741 257 aaPredicted RBP14.06□□□□□ -0.16
LSM5-204ENST00000409909 MLLT11Q13015 90 aaPredicted RBP14.06□□□□□ -0.16
LSM5-204ENST00000409909 HES1Q14469 280 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 CT45A1Q5HYN5 189 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 C9orf152Q5JTZ5 239 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 NKAPLQ5M9Q1 402 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 C10orf99Q6UWK7 81 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 SLC25A48Q6ZT89 311 aaKnown RBP14.06□□□□□ -0.16
LSM5-204ENST00000409909 MOB3BQ86TA1 216 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 OR10V1Q8NGI7 309 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 CT45A3Q8NHU0 189 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 MGLLQ99685 303 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 NICN1Q9BSH3 213 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms