RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 OR5C1Q8NGR4 320 aa14.27□□□□□ -0.13
NUP50-203ENST00000407019 OR10Z1Q8NGY1 313 aa14.27□□□□□ -0.13
NUP50-203ENST00000407019 OR2G3Q8NGZ4 309 aa14.27□□□□□ -0.13
NUP50-203ENST00000407019 PRELID3BQ9Y3B1 194 aa14.27□□□□□ -0.13
NUP50-203ENST00000407019 KNTC1P50748 2209 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 A0A0G2JRQ6 117 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 A0A1B0GU03 582 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 CDRT15L2A8MXV6 281 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 UMAD1C9J7I0 102 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.26□□□□□ -0.13
NUP50-203ENST00000407019 CDIPTO14735 213 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 HSPA12AO43301 675 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 CHST1O43916 411 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 SLC25A6P12236 298 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 EPHA1P21709 976 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 DYNLT3P51808 116 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 ALKBH6Q3KRA9 238 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 Q6ZT83 130 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 PRR18Q8N4B5 295 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 GPR146Q96CH1 333 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 PBDC1Q9BVG4 233 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 TMEM210A6NLX4 147 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 SH2D1BO14796 132 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 CST7O76096 145 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 ZNF146Q15072 292 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 TESK1Q15569 626 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 OR8G1Q15617 311 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 FDCSPQ8NFU4 85 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 RNASE11Q8TAA1 199 aaKnown RBP14.26□□□□□ -0.13
NUP50-203ENST00000407019 RNF115Q9Y4L5 304 aa14.26□□□□□ -0.13
NUP50-203ENST00000407019 MED19A0JLT2 244 aaPredicted RBP14.25□□□□□ -0.13
NUP50-203ENST00000407019 PSG7Q13046 419 aa14.25□□□□□ -0.13
NUP50-203ENST00000407019 SRSF6Q13247 344 aaKnown RBP14.25□□□□□ -0.13
NUP50-203ENST00000407019 GUSBP1Q15486 140 aa14.25□□□□□ -0.13
NUP50-203ENST00000407019 PIP4P1Q86T03 277 aa14.25□□□□□ -0.13
NUP50-203ENST00000407019 IGLV2-14P01704 120 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 GRPP07492 148 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 PPP1CCP36873 323 aaKnown RBP14.24□□□□□ -0.13
NUP50-203ENST00000407019 PAX9P55771 341 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 TMEM217Q8N7C4 229 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 CNEP1R1Q8N9A8 125 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 SNIP1Q8TAD8 396 aaKnown RBP14.24□□□□□ -0.13
NUP50-203ENST00000407019 SMCO4Q9NRQ5 59 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 MBNL3Q9NUK0 354 aaKnown RBP14.24□□□□□ -0.13
NUP50-203ENST00000407019 KCNS2Q9ULS6 477 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 WIPI2Q9Y4P8 454 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 RBM7Q9Y580 266 aaKnown RBP14.24□□□□□ -0.13
NUP50-203ENST00000407019 IGHV3-64DA0A0J9YX35 117 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 CNOT4O95628 575 aaKnown RBP14.24□□□□□ -0.13
NUP50-203ENST00000407019 HOXB1P14653 301 aaPredicted RBP14.24□□□□□ -0.13
NUP50-203ENST00000407019 HOXC12P31275 282 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 AKIRIN2Q53H80 203 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 FIP1L1Q6UN15 594 aaKnown RBP14.24□□□□□ -0.13
NUP50-203ENST00000407019 GNPNAT1Q96EK6 184 aaPredicted RBP14.24□□□□□ -0.13
NUP50-203ENST00000407019 PPP1R3CQ9UQK1 317 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 RFNGQ9Y644 331 aa14.24□□□□□ -0.13
NUP50-203ENST00000407019 ESPL1Q14674 2120 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 A0A1B0GW64 132 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 H0YL77 283 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 CBR1P16152 277 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 MPV17P39210 176 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 RPL23AP62750 156 aaKnown RBP14.23□□□□□ -0.13
NUP50-203ENST00000407019 STX12Q86Y82 276 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 KDF1Q8NAX2 398 aaPredicted RBP14.23□□□□□ -0.13
NUP50-203ENST00000407019 DEFB124Q8NES8 71 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 OR8G5Q8NG78 346 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 KLF14Q8TD94 323 aaPredicted RBP14.23□□□□□ -0.13
NUP50-203ENST00000407019 RXFP4Q8TDU9 374 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 LSM10Q969L4 123 aaKnown RBP14.23□□□□□ -0.13
NUP50-203ENST00000407019 RAB40CQ96S21 281 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 ATP5SQ99766 215 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 OBP2BQ9NPH6 170 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 LIN7CQ9NUP9 197 aaKnown RBP14.23□□□□□ -0.13
NUP50-203ENST00000407019 FBXO7Q9Y3I1 522 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 MED12LQ86YW9 2145 aa14.23□□□□□ -0.13
NUP50-203ENST00000407019 A0A1B0GV50 99 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 AQP7O14520 342 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 HAND1O96004 215 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 IGKV1-39P01597 117 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 IGKV1D-39P04432 117 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 FTH1P19P0C7X4 201 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 IGFL2Q6UWQ7 119 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 UBALD1Q8TB05 177 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 SAV1Q9H4B6 383 aaPredicted RBP14.22□□□□□ -0.13
NUP50-203ENST00000407019 DOCK7Q96N67 2140 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.22□□□□□ -0.13
NUP50-203ENST00000407019 ACAA1P09110 424 aaPredicted RBP14.22□□□□□ -0.13
NUP50-203ENST00000407019 COX5AP20674 150 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 AVPI1Q5T686 147 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 C1orf162Q8NEQ5 155 aaPredicted RBP14.22□□□□□ -0.13
NUP50-203ENST00000407019 SLC35B3Q9H1N7 401 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 HES4Q9HCC6 221 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 ASCL3Q9NQ33 180 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 RPS10P5Q9NQ39 176 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 OR14J1Q9UGF5 321 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 TINAGQ9UJW2 476 aa14.22□□□□□ -0.13
NUP50-203ENST00000407019 TRAV17A0A0B4J275 112 aa14.21□□□□□ -0.13
NUP50-203ENST00000407019 KIAA1324LA8MWY0 1029 aaPredicted RBP14.21□□□□□ -0.13
NUP50-203ENST00000407019 TXNL1O43396 289 aa14.21□□□□□ -0.13
NUP50-203ENST00000407019 DFFBO76075 338 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms