RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PXT1Q8NFP0 134 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 UTP4Q969X6 686 aaKnown RBP6.43□□□□□ -1.38
SCFD1-202ENST00000396629 RITA1Q96K30 269 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 NABP2Q9BQ15 211 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 FAM110AQ9BQ89 295 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 TMED9Q9BVK6 235 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 PRRG3Q9BZD7 231 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 CST11Q9H112 138 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 WARS2Q9UGM6 360 aaKnown RBP6.43□□□□□ -1.38
SCFD1-202ENST00000396629 FOXA2Q9Y261 457 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-202ENST00000396629 IGHV3-43A0A0B4J1X8 118 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 A0A1W2PN81 502 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 RGS11O94810 467 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 IGHV3-43DP0DP04 118 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 CHRNA7P36544 502 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 ZNF134P52741 427 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 ACTBP60709 375 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 NDPQ00604 133 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 KISS1Q15726 138 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 C5orf64Q2M2E5 130 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 CT45A1Q5HYN5 189 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 ZNF691Q5VV52 312 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 FDX2Q6P4F2 183 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 FAHD1Q6P587 224 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 TCTEX1D1Q8N7M0 179 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 SUMF2Q8NBJ7 301 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 NPBQ8NG41 125 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 OR10AC1Q8NH08 325 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 CT45A3Q8NHU0 189 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 RSRP1Q9BUV0 290 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 DPCDQ9BVM2 203 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-202ENST00000396629 ANKRD60Q9BZ19 345 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 IFT22Q9H7X7 185 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 FRRS1LQ9P0K9 344 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 ERGIC3Q9Y282 383 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 FBXO7Q9Y3I1 522 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 NUBP2Q9Y5Y2 271 aa6.43□□□□□ -1.38
SCFD1-202ENST00000396629 TMEM30CPA0ZSE6 113 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 NBR2O15453 112 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 NDUFA3O95167 84 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 IGHV3-11P01762 117 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 EGR2P11161 476 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-202ENST00000396629 ZNF85Q03923 595 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 ECSCRQ19T08 205 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 TP53I3Q53FA7 332 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 C12orf73Q69YU5 71 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 ZNF660Q6AZW8 331 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-202ENST00000396629 LIN54Q6MZP7 749 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 IL34Q6ZMJ4 242 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 OR51A4Q8NGJ6 313 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 UBALD1Q8TB05 177 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 CASTOR1Q8WTX7 329 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 TMEM106AQ96A25 262 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 ZNF581Q9P0T4 197 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 GNG8Q9UK08 70 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 CEPT1Q9Y6K0 416 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 SHISA3A0PJX4 238 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 DAPP51397 102 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 CCR9P51686 369 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 NANOS3P60323 173 aaKnown RBP6.42□□□□□ -1.38
SCFD1-202ENST00000396629 ZSCAN26Q16670 478 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 PIGYQ3MUY2 71 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 PYHIN1Q6K0P9 492 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 CD200R1LQ6Q8B3 271 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 ASCL4Q6XD76 172 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 FAM220AQ7Z4H9 259 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 GTSCR1Q86UQ5 136 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 OR10H4Q8NGA5 316 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 OR13C3Q8NGS6 347 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 CANT1Q8WVQ1 401 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 IL4I1Q96RQ9 567 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 ZNF251Q9BRH9 671 aa6.42□□□□□ -1.38
SCFD1-202ENST00000396629 KIAA1109Q2LD37 5005 aa6.41□□□□□ -1.38
SCFD1-202ENST00000396629 ZAR1LA6NP61 321 aa6.41□□□□□ -1.38
SCFD1-202ENST00000396629 SNX3O60493 162 aa6.41□□□□□ -1.38
SCFD1-202ENST00000396629 MT-ND4P03905 459 aa6.41□□□□□ -1.38
SCFD1-202ENST00000396629 HOXB6P17509 224 aaKnown RBP6.41□□□□□ -1.38
SCFD1-202ENST00000396629 KLF5Q13887 457 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-202ENST00000396629 TMEM30BQ3MIR4 351 aa6.41□□□□□ -1.38
SCFD1-202ENST00000396629 NHLRC3Q5JS37 347 aa6.41□□□□□ -1.38
SCFD1-202ENST00000396629 STEAP3Q658P3 488 aa6.41□□□□□ -1.38
SCFD1-202ENST00000396629 ASB9Q96DX5 294 aa6.41□□□□□ -1.38
SCFD1-202ENST00000396629 NRBF2Q96F24 287 aa6.41□□□□□ -1.38
SCFD1-202ENST00000396629 ST6GALNAC5Q9BVH7 336 aa6.41□□□□□ -1.38
SCFD1-202ENST00000396629 OR4C45A6NMZ5 311 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 SULT1B1O43704 296 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 BRI3O95415 125 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 FAM107AO95990 144 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 CSTBP04080 98 aaKnown RBP6.4□□□□□ -1.38
SCFD1-202ENST00000396629 ZP3P21754 424 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 EPHA2P29317 976 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 MECP2P51608 486 aaKnown RBP6.4□□□□□ -1.38
SCFD1-202ENST00000396629 TMEM267Q0VDI3 215 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-202ENST00000396629 TMED1Q13445 227 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 LRRC36Q1X8D7 754 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 LCN12Q6JVE5 192 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 ZNF497Q6ZNH5 498 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 KCTD20Q7Z5Y7 419 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 Q8N402 240 aa6.4□□□□□ -1.38
SCFD1-202ENST00000396629 OR10K1Q8NGX5 313 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms