RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ABCA7Q8IZY2 2146 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 ATP6V0CP27449 155 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 GNG4P50150 75 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 TCTEX1D1Q8N7M0 179 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 DYRK2Q92630 601 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 SLC2A8Q9NY64 477 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 PRNDQ9UKY0 176 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 NEUROG3Q9Y4Z2 214 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 TMEM14DPA8MWL7 114 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 TMPRSS2O15393 492 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 FGF8P55075 233 aaPredicted RBP10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 TUSC1Q2TAM9 212 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM74A3Q4VXF1 159 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 ZNF660Q6AZW8 331 aaPredicted RBP10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 BTNL3Q6UXE8 466 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 APCDD1LQ8NCL9 501 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 PIPOXQ9P0Z9 390 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 H0Y8G0 127 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 CD74P04233 296 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 COX6A1P12074 109 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 SULT1A2P50226 295 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 RANP62826 216 aaKnown RBP10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 SERF2P84101 59 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 C10orf128Q5T292 105 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 NFAM1Q8NET5 270 aaPredicted RBP10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 OR4F17Q8NGA8 305 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 CA5BP1Q8WTZ4 195 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 RAB1BQ9H0U4 201 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 SAP30LQ9HAJ7 183 aa10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 RCC2Q9P258 522 aaKnown RBP10.29□□□□□ -0.76
DEPDC1-201ENST00000370966 ZNF98A6NK75 572 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 OR5H1A6NKK0 313 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 DPPA3Q6W0C5 159 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 LINC00114Q6XXX2 140 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 SIRT7Q9NRC8 400 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 TECRQ9NZ01 308 aaKnown RBP10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 CLCF1Q9UBD9 225 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 GREB1Q4ZG55 1949 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 SPAARA0A1B0GVQ0 90 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 LOC390937A0A1W2PQ73 354 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 LMX1BO60663 402 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 OR2A4O95047 310 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 COX19Q49B96 90 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 PLAC9Q5JTB6 97 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 FNDC7Q5VTL7 733 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 LYPD8Q6UX82 237 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 MYPOPQ86VE0 399 aaPredicted RBP10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 RND1Q92730 232 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 MISP3Q96FF7 219 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 OR2A7Q96R45 310 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 WDR61Q9GZS3 305 aaKnown RBP10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 MSL2Q9HCI7 577 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 PITX3O75364 302 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 HOXD4P09016 255 aaPredicted RBP10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 PSG2P11465 335 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 P2RY4P51582 365 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 KHDC3LQ587J8 217 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 SPINK9Q5DT21 86 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 SLC35E3Q7Z769 313 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 OR10D4PQ8NGN7 298 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 PKIBQ9C010 78 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 PRDM14Q9GZV8 571 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 PRSS50Q9UI38 385 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 TRAV39A0A0B4J263 110 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 CTXND1A0A1B0GTU2 59 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 H0Y980 276 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 AP4M1O00189 453 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 PPIHO43447 177 aaKnown RBP10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 AGFG2O95081 481 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 IGHV3-13P01766 116 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 IGHV3-7P01780 117 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 RBP4P02753 201 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 SPINK2P20155 84 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 UCP2P55851 309 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 ACSM6Q6P461 480 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 SAXO1Q8IYX7 474 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 TMEM252Q8N6L7 170 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 OR2T10Q8NGZ9 312 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 TMEM222Q9H0R3 208 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 ONECUT1Q9UBC0 465 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 NAT8BQ9UHF3 227 aa10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 COLQQ9Y215 455 aaPredicted RBP10.28□□□□□ -0.76
DEPDC1-201ENST00000370966 SEC14L6B5MCN3 397 aa10.27□□□□□ -0.76
DEPDC1-201ENST00000370966 MGST3O14880 152 aa10.27□□□□□ -0.76
DEPDC1-201ENST00000370966 MEOX2P50222 304 aa10.27□□□□□ -0.76
DEPDC1-201ENST00000370966 IFITM2Q01629 132 aa10.27□□□□□ -0.76
DEPDC1-201ENST00000370966 IQCJQ1A5X6 159 aa10.27□□□□□ -0.76
DEPDC1-201ENST00000370966 OVCH2Q7RTZ1 564 aa10.27□□□□□ -0.76
DEPDC1-201ENST00000370966 ANAPC16Q96DE5 110 aa10.27□□□□□ -0.76
DEPDC1-201ENST00000370966 NCBP2LA6PVI3 153 aaKnown RBP10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 AHRRA9YTQ3 701 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 C16orf97H3BN30 126 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 SYNGR1O43759 233 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 DEDDO75618 318 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 SUMO1P63165 101 aaKnown RBP10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 OR5I1Q13606 314 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 SLC23A3Q6PIS1 610 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 OR1A1Q9P1Q5 309 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms