RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 RCN1Q15293 331 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 CEACAM16Q2WEN9 425 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 ALKBH6Q3KRA9 238 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 MRPL2Q5T653 305 aaKnown RBP3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 AVPI1Q5T686 147 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 C8orf74Q6P047 294 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 COMTD1Q86VU5 262 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 TMEM61Q8N0U2 210 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 DEFB108BQ8NET1 73 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 OR2G2Q8NGZ5 317 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 AGR3Q8TD06 166 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 STMN2Q93045 179 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 DDIT4LQ96D03 193 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 CCDC126Q96EE4 140 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 NEURL3Q96EH8 262 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 TEX37Q96LM6 180 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 ZNF317Q96PQ6 595 aaPredicted RBP3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 TSPAN32Q96QS1 320 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 LINC00470Q9BZP3 86 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 CRLF2Q9HC73 371 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 DYNLRB1Q9NP97 96 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 MMP26Q9NRE1 261 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 PDP1Q9P0J1 537 aaPredicted RBP3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 NUP50Q9UKX7 468 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 SLC35A3Q9Y2D2 325 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 WNK1Q9H4A3 2382 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 DYSFO75923 2080 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 IGKV1D-42A0A075B6H8 117 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 C12orf71A8MTZ7 269 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 TMEM114B3SHH9 223 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 TRAPPC2LH3BP13 241 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 M0R233 179 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 TRAF3IP2O43734 574 aaPredicted RBP3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 MPZL1O95297 269 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 TFPTP0C1Z6 253 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 ZNF43P17038 809 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 ELK1P19419 428 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 PRPS1L1P21108 318 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 MDKP21741 143 aaPredicted RBP3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 PRTN3P24158 256 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 ALDH3A1P30838 453 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 CASQ1P31415 396 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 GLRXP35754 106 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 ARR3P36575 388 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 CDKN2CP42773 168 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 NPBWR2P48146 333 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 CCL8P80075 99 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 HOXC5Q00444 222 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 EMX2Q04743 252 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 DAZ2Q13117 558 aaKnown RBP3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 CASP8Q14790 479 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 CCDC153Q494R4 210 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 C1orf140Q5VVS0 124 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 CARD17Q5XLA6 110 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 UGT2A3Q6UWM9 527 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 ZNF836Q6ZNA1 936 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 PUSL1Q8N0Z8 303 aaKnown RBP3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 C4orf33Q8N1A6 199 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 OR8J2Q8NGG1 315 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 SLC35G5Q96KT7 338 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 PPP3R2Q96LZ3 170 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 ZIM3Q96PE6 472 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 OR2M2Q96R28 347 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 SH3GL1Q99961 368 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 RASL11BQ9BPW5 248 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 KCNS3Q9BQ31 491 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 NRIP2Q9BQI9 281 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 EMC6Q9BV81 110 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 SUCNR1Q9BXA5 334 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 DAZ3Q9NR90 486 aaKnown RBP3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 CCL28Q9NRJ3 127 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 SLC17A7Q9P2U7 560 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 TENM3Q9P273 2699 aa3.82□□□□□ -1.8
RNU4-39P-201ENST00000362455 DSPPQ9NZW4 1301 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 IGLV3-9A0A075B6K5 115 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 LOC102725191A0A1B0GVB3 256 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 M0R3G1 203 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 SOX15O60248 233 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 MGRN1O60291 552 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 VAMP5O95183 116 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 CPSF4O95639 269 aaKnown RBP3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 GIPP09681 153 aaPredicted RBP3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 CCL2P13500 99 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 OMGP23515 440 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 CXCR1P25024 350 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 CTRLP40313 264 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 RPS5P46782 204 aaKnown RBP3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 SH3BGRP55822 239 aaPredicted RBP3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 NAA20P61599 178 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 LCN2P80188 198 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 PSG7Q13046 419 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 KIAA0087Q14695 138 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 SLC9A3R2Q15599 337 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 TRMT10CQ7L0Y3 403 aaKnown RBP3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 ABHD12BQ7Z5M8 362 aaPredicted RBP3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 C20orf196Q8IYI0 205 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 NATD1Q8N6N6 113 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 SUMF2Q8NBJ7 301 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 OR4A15Q8NGL6 344 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms