RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FUT3P21217 361 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 SRIP30626 198 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 B4GALNT1Q00973 533 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 SLC39A5Q6ZMH5 540 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 SELENOHQ8IZQ5 122 aaKnown RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 GMLQ99445 158 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 FZD8Q9H461 694 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 FNDC4Q9H6D8 234 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 GEMIN7Q9H840 131 aaKnown RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 TMEM30AQ9NV96 361 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 IL36GQ9NZH8 169 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 TAAR2Q9P1P5 351 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 TCFL5Q9UL49 500 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 COL22A1Q8NFW1 1626 aaPredicted RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 TRAV39A0A0B4J263 110 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 A0A1W2PRS3 328 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 GAGE12BA1L429 117 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 TRGC1P0CF51 173 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 GDF1P27539 372 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 SAMD5Q5TGI4 173 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 C10orf113Q5VZT2 155 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 OR52E1Q8NGJ3 308 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 ARHGAP5-AS1Q96IT6 56 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 TEX37Q96LM6 180 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 SPINK8P0C7L1 97 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 LCN2P80188 198 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 ACSF3Q4G176 576 aaPredicted RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 KREMEN2Q8NCW0 462 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 OR10D3Q8NH80 312 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 ZG16BQ96DA0 208 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 CISD1Q9NZ45 108 aaKnown RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 TMEM250H0YL14 139 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 RAB9AP51151 201 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 PSG5Q15238 335 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 ZNF770Q6IQ21 691 aaPredicted RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 SPNS2Q8IVW8 549 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 MS4A6EQ96DS6 147 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 C14orf144Q96I85 54 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 TNFSF18Q9UNG2 199 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 CDC14CA4D256 554 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 ICOSLGO75144 302 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 NHLRC3Q5JS37 347 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 SDHCQ99643 169 aaPredicted RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 GLIPR2Q9H4G4 154 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 LYRM4Q9HD34 91 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 SLC52A3Q9NQ40 469 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 HINT3Q9NQE9 182 aaKnown RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 CLN8Q9UBY8 286 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 A0A0G2JMM0 328 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 A0A1W2PPB8 328 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 KIR3DP1A8MWS1 328 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 CEACAM6P40199 344 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 MPLP40238 635 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 SPANXN1Q5VSR9 72 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 OR2V1Q8NHB1 315 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 SCAMP4Q969E2 229 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 RASL11BQ9BPW5 248 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 C20orf27Q9GZN8 174 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 INSL5Q9Y5Q6 135 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 TCRBV5S2A0A599 114 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 DLX6P56179 175 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 FAM53AQ6NSI3 398 aaPredicted RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 SYT8Q8NBV8 401 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 ST20Q9HBF5 79 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 PLEKHB1Q9UF11 243 aaPredicted RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 DSPPQ9NZW4 1301 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 C5orf49A4QMS7 147 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 PPIAL4DF5H284 164 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 HOXD4P09016 255 aaPredicted RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 VMA21Q3ZAQ7 101 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 MRGPREQ86SM8 312 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 ASB5Q8WWX0 329 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 IL17FQ96PD4 163 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 CDCA3Q99618 268 aaPredicted RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 HSD17B10Q99714 261 aaKnown RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 NPDC1Q9NQX5 325 aaPredicted RBP5.47□□□□□ -1.53
VCAN-203ENST00000343200 MMP17Q9ULZ9 603 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 TIMM10BQ9Y5J6 103 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 PKD1L2Q7Z442 2459 aa5.47□□□□□ -1.53
VCAN-203ENST00000343200 TMED7-TICAM2A0A0A6YYA0 188 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 TLCD2A6NGC4 264 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 M0R082 166 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 RRHO14718 337 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 NDUFC2O95298 119 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 CRYAAP02489 173 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 MGPP08493 103 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 KLK2P20151 261 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 VDAC1P21796 283 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 OTX1P32242 354 aaPredicted RBP5.46□□□□□ -1.53
VCAN-203ENST00000343200 HTR6P50406 440 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 HBBP68871 147 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 SRSF6Q13247 344 aaKnown RBP5.46□□□□□ -1.53
VCAN-203ENST00000343200 GCSAMLQ5JQS6 135 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 NKAIN4Q8IVV8 208 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 APOBEC3BQ9UH17 382 aaKnown RBP5.46□□□□□ -1.53
VCAN-203ENST00000343200 ZNF840PA6NDX5 716 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 MPDU1O75352 247 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 NTHL1P78549 312 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 HYAL1Q12794 435 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms