RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 C17orf98A8MV24 154 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 H0YL77 283 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 OVOL3O00110 214 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 GPR31O00270 319 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 SH2D1BO14796 132 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 MPPED1O15442 326 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 C6orf183Q5T699 404 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 ZNF833PQ6ZTB9 187 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 OR5M9Q8NGP3 310 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 COQ8AQ8NI60 647 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 LHFPL5Q8TAF8 219 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 MARCH1Q8TCQ1 289 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 TNFRSF14Q92956 283 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 SMIM8Q96KF7 97 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 PAPOLGQ9BWT3 736 aaKnown RBP4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 GCM1Q9NP62 436 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 PLEKHJ1Q9NW61 149 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 KCNIP1Q9NZI2 227 aa4.46□□□□□ -1.69
PRPF4B-201ENST00000337659 TMEM30CPA0ZSE6 113 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 C16orf97H3BN30 126 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 F10P00742 488 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 PMP2P02689 132 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 TMEM225BP0DP42 221 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 S100A11P31949 105 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 ZNF672Q499Z4 452 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 DPPA3Q6W0C5 159 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 ZNF841Q6ZN19 808 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 HSD17B13Q7Z5P4 300 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 SLC51BQ86UW2 128 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 CCDC71LQ8N9Z2 235 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 UBAC2Q8NBM4 344 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 ZNF680Q8NEM1 530 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 OR52B4Q8NGK2 314 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 C14orf79Q96F83 325 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 PLEKHA2Q9HB19 425 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 COMMD9Q9P000 198 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 INTS1Q8N201 2190 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 ZZEF1O43149 2961 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 PKDREJQ9NTG1 2253 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 TRGV8A0A0C4DH27 118 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 UBE2QL1A1L167 161 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 A6NL46 340 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 PMS2P5A8MQ11 134 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 MGST3O14880 152 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 PSPNO60542 156 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 LYZL6O75951 148 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 IGHV2-70P01814 119 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 RRASP10301 218 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 EGR1P18146 543 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 AADACP22760 399 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 ERVS71-1P61550 626 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 RBPJQ06330 500 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 SMIM21Q3B7S5 101 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 TMUB2Q71RG4 321 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 C11orf42Q8N5U0 333 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 SCARB1Q8WTV0 552 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 PIGCQ92535 297 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 DVL3Q92997 716 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 PCGF1Q9BSM1 259 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 TAAR3PQ9P1P4 343 aa4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 MYEF2Q9P2K5 600 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-201ENST00000337659 A6NNC1 897 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 K7EPK0 472 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 PRRG2O14669 202 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 NDUFA2O43678 99 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 PGLYRP1O75594 196 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 HKR1P10072 659 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 CCNOP22674 350 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 KIR2DS2P43631 304 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 TMEM155Q4W5P6 130 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 C4orf17Q53FE4 359 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 SSX9Q7RTT3 188 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 BHLHE23Q8NDY6 225 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 TMEM190Q8WZ59 177 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 ST6GALNAC6Q969X2 333 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 WDR89Q96FK6 387 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 SPACA5Q96QH8 159 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 HDHD3Q9BSH5 251 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 RIF1Q5UIP0 2472 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 ZNF729A6NN14 1252 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 LY6LH3BQJ8 138 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 PSG2P11465 335 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 CA6P23280 308 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 PSMB6P28072 239 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 PAX9P55771 341 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 ATP5IP56385 69 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 BAXQ07812 192 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 NKPD1Q17RQ9 610 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 IGSF11Q5DX21 431 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 OR2T2Q6IF00 324 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 ZNF818PQ6ZRF7 136 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 OR2G3Q8NGZ4 309 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 PHF21AQ96BD5 680 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 ZNF2Q9BSG1 426 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 RAB9BQ9NP90 201 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 IL36RNQ9UBH0 155 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 RCL1Q9Y2P8 373 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 IGKV1D-13A0A0B4J2D9 117 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 FAM230AA0A1W2PPH8 454 aa4.45□□□□□ -1.7
PRPF4B-201ENST00000337659 C17orf100A8MU93 164 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms