RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 MAGEA13PA6NCF6 341 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 CASQ2O14958 399 aaPredicted RBP13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 OGG1O15527 345 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 ORC5O43913 435 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 CD1BP29016 333 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 BDKRB2P30411 391 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 LUMP51884 338 aaPredicted RBP13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 ZNF134P52741 427 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 F2RL1P55085 397 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 GPR50Q13585 617 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 MPV17LQ2QL34 196 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 SLC22A6Q4U2R8 563 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 LINC00596Q86U02 117 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 S1PR3Q99500 378 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 HSPB9Q9BQS6 159 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 C9orf16Q9BUW7 83 aa13.68□□□□□ -0.22
EXOSC4-201ENST00000316052 MOSP00540 346 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 LALBAP00709 142 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 IGFBP3P17936 291 aaPredicted RBP13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 VHLP40337 213 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 CDX1P47902 265 aaPredicted RBP13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 PPP3R1P63098 170 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 CFHR3Q02985 330 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 FOXE3Q13461 319 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 KIR2DS1Q14954 304 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 CXorf66Q5JRM2 361 aaPredicted RBP13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 RNF152Q8N8N0 203 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 ZNF439Q8NDP4 499 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 NEK7Q8TDX7 302 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 CYYR1Q96J86 154 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 S100A13Q99584 98 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 ZNF184Q99676 751 aaPredicted RBP13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 VCX3BQ9H321 246 aa13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 LSM4Q9Y4Z0 139 aaKnown RBP13.67□□□□□ -0.22
EXOSC4-201ENST00000316052 C12orf77C9JDV5 145 aa13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 AIPO00170 330 aa13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 CT45A1Q5HYN5 189 aa13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 SYT6Q5T7P8 510 aaPredicted RBP13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 SLC25A48Q6ZT89 311 aaKnown RBP13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 PQLC1Q8N2U9 271 aa13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 FAM71E2Q8N5Q1 922 aa13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 CT45A3Q8NHU0 189 aa13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 PAK1IP1Q9NWT1 392 aaPredicted RBP13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 BABAM2Q9NXR7 383 aa13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 CLEC2DQ9UHP7 191 aa13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 DNAH7Q8WXX0 4024 aa13.66□□□□□ -0.22
EXOSC4-201ENST00000316052 TRBV5-5A0A0J9YX44 114 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 ZNF780AO75290 641 aaPredicted RBP13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 GPX5O75715 221 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 ELANEP08246 267 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 GTF2F2P13984 249 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 IL3RAP26951 378 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 DCKP27707 260 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 ZNF137PP52743 207 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 RPS11P62280 158 aaKnown RBP eCLIP13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 TMPRSS11AQ6ZMR5 421 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 OR10V1Q8NGI7 309 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 OR8U1Q8NH10 309 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 OR4K15Q8NH41 348 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 OR1L1Q8NH94 360 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 GHSRQ92847 366 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 SMIM19Q96E16 107 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 PRR25Q96S07 402 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 RASL11BQ9BPW5 248 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 GON7Q9BXV9 100 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 RCC2Q9P258 522 aaKnown RBP13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 ZMAT5Q9UDW3 170 aaKnown RBP13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 SCOCQ9UIL1 159 aa13.65□□□□□ -0.22
EXOSC4-201ENST00000316052 TRAV8-7A0A075B6U6 113 aa13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 RAMP3O60896 148 aa13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 BAG2O95816 211 aa13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 IGHG4P01861 327 aa13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 GP2P55259 537 aaKnown RBP13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 DCTN2Q13561 401 aaKnown RBP13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 Q3ZCU0 254 aa13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 NKAPLQ5M9Q1 402 aa13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 DMKNQ6E0U4 476 aaPredicted RBP13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 C5orf24Q7Z6I8 188 aa13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 OR5M8Q8NGP6 311 aa13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 TRAPPC2LQ9UL33 140 aa13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 LRRC42Q9Y546 428 aa13.64□□□□□ -0.23
EXOSC4-201ENST00000316052 A0A1W2PPK0 400 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 HBZP02008 142 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 RCC1P18754 421 aaPredicted RBP13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 SOX6P35712 828 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 RAB12Q6IQ22 244 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 GAPTQ8N292 157 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 PRR18Q8N4B5 295 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 STX19Q8N4C7 294 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 ZFP41Q8N8Y5 198 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 OR8H1Q8NGG4 311 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 NRG4Q8WWG1 115 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 MUL1Q969V5 352 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 KCTD7Q96MP8 289 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 ETAA1Q9NY74 926 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 GNG12Q9UBI6 72 aa13.63□□□□□ -0.23
EXOSC4-201ENST00000316052 TRBV5-7A0A0A0MS05 114 aa13.62□□□□□ -0.23
EXOSC4-201ENST00000316052 SEC14L6B5MCN3 397 aa13.62□□□□□ -0.23
EXOSC4-201ENST00000316052 MCRIP1C9JLW8 97 aa13.62□□□□□ -0.23
EXOSC4-201ENST00000316052 SPINT2O43291 252 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms