RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 SYNGR2O43760 224 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 PSMB5P28074 263 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 CKS2P33552 79 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 ADCYAP1R1P41586 468 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 HBBP68871 147 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 IFITM2Q01629 132 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 DCAF10Q5QP82 559 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 WDTC1Q8N5D0 677 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 OTOSQ8NHW6 89 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 DNAJC30Q96LL9 226 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 SYT11Q9BT88 431 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 GNB1LQ9BYB4 327 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 RARRES3Q9UL19 164 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 H7C1H1 209 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 CEACAM3P40198 252 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 C16orf82Q7Z2V1 217 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 ZDHHC23Q8IYP9 409 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 GJB3O75712 270 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 CER1O95813 267 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 ERVK11-1P61568 191 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 SLC39A5Q6ZMH5 540 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 ALG14Q96F25 216 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 PLSCR2Q9NRY7 297 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 SLC6A13Q9NSD5 602 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 PRRC2CQ9Y520 2896 aaKnown RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 TRAV9-2A0A087WT02 112 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 A0A1B0GWA3 101 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 H0YIG0 161 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 KLK8O60259 260 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 GYPBP06028 91 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 CFHP08603 1231 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 TMIGD3P0DMS9 266 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 FGF5P12034 268 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 C12orf73Q69YU5 71 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 ATP6V0BQ99437 205 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 CLEC5AQ9NY25 188 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 TIMM8AO60220 97 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 PDCD6O75340 191 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 CAMPP49913 170 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF117Q03924 483 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 SRSF6Q13247 344 aaKnown RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 SLC48A1Q6P1K1 146 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 OR8A1Q8NGG7 326 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 MRPL32Q9BYC8 188 aaKnown RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 MMP25Q9NPA2 562 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 G6PC2Q9NQR9 355 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 PTGDR2Q9Y5Y4 395 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 A0A1W2PR80 420 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 KLRG2A4D1S0 409 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 B4DGG1 531 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 C8orf89P0DMQ9 161 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 CTAG1AP78358 180 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 KLF9Q13886 244 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 IBA57Q5T440 356 aaKnown RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 C1orf140Q5VVS0 124 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 RGS7BPQ6MZT1 257 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 OR10AD1Q8NGE0 317 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 OR52M1Q8NGK5 317 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 MZB1Q8WU39 189 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM106BQ9NUM4 274 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 C3orf85A0A1B0GTC6 90 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 MYADML2A6NDP7 307 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 PRICKLE3O43900 615 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 INSM1Q01101 510 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 ADOQ96SZ5 270 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 WDR13Q9H1Z4 485 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 TRBV23-1A0A0A0MS06 115 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 A0A1B0GW64 132 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 H3BRM9 83 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 GNG3P63215 75 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 POM121L1PQ3SYA9 428 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 WNT10BO00744 389 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 SLC25A20O43772 301 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 CAPZBP47756 277 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 GBGT1Q8N5D6 347 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 NPEPL1Q8NDH3 523 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 RSRP1Q9BUV0 290 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 MRPL18Q9H0U6 180 aaKnown RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 SERGEFQ9UGK8 458 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 PAPPAQ13219 1627 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM189A5PLL7 270 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 CXCL14O95715 111 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 RBP4P02753 201 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 PPP1CCP36873 323 aaKnown RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 IER3P46695 156 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 RPS16P62249 146 aaKnown RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 MYBPHQ13203 477 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 CD84Q9UIB8 345 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 H3BSH0 61 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 IFI6P09912 130 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 MUC1P15941 1255 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 LGALS3P17931 250 aaKnown RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 PRDX2P32119 198 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 HSF4Q9ULV5 492 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 A0A0U1RQF3 1178 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 MARCH11A6NNE9 402 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 SRSF10O75494 262 aaKnown RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 ACSF3Q4G176 576 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-201ENST00000297405 LDLRAD3Q86YD5 345 aa4.29□□□□□ -1.72
CSMD3-201ENST00000297405 OR1F12Q8NHA8 337 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms