RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 VDAC1P21796 283 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 Q96M66 194 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 FER1L6-AS2Q96M78 137 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 TPPP3Q9BW30 176 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 CHST5Q9GZS9 411 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 WNT5BQ9H1J7 359 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 ARRDC1-AS1Q9H2J1 176 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 YKT6O15498 198 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 TGOLN2O43493 480 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 HIKESHIQ53FT3 197 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 FAM27BQ5VT28 67 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 RBMXL3Q8N7X1 1067 aaKnown RBP4□□□□□ -1.77
VPS13C-201ENST00000249837 PCED1AQ9H1Q7 454 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 IGSF23A1L1A6 192 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 LINC00587B1AMM8 73 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 CLDN34H7C241 214 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 OR2Y1Q8NGV0 311 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 IP6K3Q96PC2 410 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 AQP10Q96PS8 301 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 FAM103A1Q9BTL3 118 aaKnown RBP4□□□□□ -1.77
VPS13C-201ENST00000249837 PMS2P11Q13670 270 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 MUCL1Q96DR8 90 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 RTBDNQ9BSG5 229 aaPredicted RBP4□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM147Q9BVK8 224 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 GPR87Q9BY21 358 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 TREM2Q9NZC2 230 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 KIAA1549Q9HCM3 1950 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 A0A1B0GTQ1 180 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 OR7C2O60412 319 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 GALR1P47211 349 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 PHYHD1Q5SRE7 291 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 C22orf15Q8WYQ4 148 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF837Q96EG3 531 aaPredicted RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 ANKHD1Q8IWZ3 2542 aaKnown RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 A0A0U1RQV5 110 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 FCGR3BO75015 233 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TRGC2P03986 189 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 WDR25Q64LD2 544 aaPredicted RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF343Q6P1L6 599 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 VOPP1Q96AW1 172 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 MEGF10Q96KG7 1140 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TXN2Q99757 166 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 FAM173AQ9BQD7 235 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 NAT8Q9UHE5 227 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 OPN1MWP04001 364 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 DANCRP0C864 163 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 OPN1MW2P0DN77 364 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 OPN1MW3P0DN78 364 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF17P17021 662 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TIGITQ495A1 244 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TMPRSS7Q7RTY8 843 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM252Q8N6L7 170 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 OR2Z1Q8NG97 314 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 MSI2Q96DH6 328 aaKnown RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 WFIKKN1Q96NZ8 548 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 PITX3O75364 302 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 PLGLAQ15195 96 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 BTNL8Q6UX41 500 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 ZMAT5Q9UDW3 170 aaKnown RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 NAV3Q8IVL0 2385 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 CT55Q8WUE5 264 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TRGV5A0A0B4J1U4 118 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 RPS2P15880 293 aaKnown RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 OR10AD1Q8NGE0 317 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 LILRB1Q8NHL6 650 aaPredicted RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 DMRTA2Q96SC8 542 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 MUC6Q6W4X9 2439 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 C5orf24Q7Z6I8 188 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 DAZAP1Q96EP5 407 aaKnown RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF586Q9NXT0 402 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 SONP18583 2426 aaKnown RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 F8VVB4 439 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 F8VWA3 439 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 SYNGR1O43759 233 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 PAGE4O60829 102 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 GYPAP02724 150 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 EIF3IQ13347 325 aaKnown RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM187Q14656 261 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TOMM20LQ6UXN7 152 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 DBX2Q6ZNG2 339 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 EIF4E3Q8N5X7 224 aaKnown RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 SIGLECL1Q8N7X8 197 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 CA5BP1Q8WTZ4 195 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 GALMQ96C23 342 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 OR4C12Q96R67 309 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 SPSB2Q99619 263 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF391Q9UJN7 358 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 OTOGLQ3ZCN5 2332 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 RNF151Q2KHN1 245 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 MOB3AQ96BX8 217 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 CIB3Q96Q77 187 aaPredicted RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 WFDC1Q9HC57 220 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 RPRMQ9NS64 109 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 A0A1W2PR77 199 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 OR5B21A6NL26 309 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 H0Y8G0 127 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 PGA5P0DJD9 388 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 PMELP40967 661 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 RPL29P47914 159 aaKnown RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 CEBPDP49716 269 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 973.7 ms