RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	CEACAM3	P40198	252 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SLCO1A2	P46721	670 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RAP1GDS1	P52306	607 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	DR1	Q01658	176 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CKAP4	Q07065	602 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	MPPED2	Q15777	294 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	GABRA6	Q16445	453 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	THEM4	Q5T1C6	240 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	STEAP4	Q687X5	459 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	LRRC25	Q8N386	305 aa	Predicted RBP	4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	TCAIM	Q8N3R3	496 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OR51F2	Q8NH61	342 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SEH1L	Q96EE3	360 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RILP	Q96NA2	401 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	EFCAB11	Q9BUY7	163 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	DERL2	Q9GZP9	239 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	PLEKHF2	Q9H8W4	249 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SNX24	Q9Y343	169 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	XRCC2	O43543	280 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	TGM6	O95932	706 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CLPS	P04118	112 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	EIF4E	P06730	217 aa	Known RBP	4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RAB4A	P20338	218 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OPRM1	P35372	400 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CDK9	P50750	372 aa	Known RBP	4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	XK	P51811	444 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	LCN2	P80188	198 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	NNAT	Q16517	81 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	HES5	Q5TA89	166 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	C3orf62	Q6ZUJ4	267 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	MRPL55	Q7Z7F7	128 aa	Known RBP	4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CTAGE3P	Q8IX95	158 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	GIMAP1	Q8WWP7	306 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	LRRC39	Q96DD0	335 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	WDR34	Q96EX3	536 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	FAM210B	Q96KR6	192 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	UGT2B28	Q9BY64	529 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ANGPTL4	Q9BY76	406 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	MS4A12	Q9NXJ0	267 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OPTC	Q9UBM4	332 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SNX12	Q9UMY4	172 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RNF11	Q9Y3C5	154 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ASB4	Q9Y574	426 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ROS1	P08922	2347 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CSPG4	Q6UVK1	2322 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	EXPH5	Q8NEV8	1989 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	PRR14L	Q5THK1	2151 aa		4.36	□□□□□ -1.71
SMARCA2-238	ENST00000635273	FN1	P02751	2386 aa	Known RBP	4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	TLN2	Q9Y4G6	2542 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	LOC100653049	A0A140TA62	436 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273		A6NDN8	102 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CA11	O75493	328 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	HSBP1	O75506	76 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	KRT34	O76011	436 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	WISP3	O95389	354 aa	Predicted RBP	4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CSTA	P01040	98 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	KLK1	P06870	262 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SLC35E2B	P0CK96	405 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	STAG3L2	P0CL84	134 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SERPINB8	P50452	374 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CCR6	P51684	374 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	PSMD4	P55036	377 aa	Known RBP	4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ATP6V0D1	P61421	351 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	HERVK_113	P61574	105 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	BIK	Q13323	160 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RCAN2	Q14206	197 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	EBP	Q15125	230 aa	Known RBP	4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	QPRT	Q15274	297 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	FBXL19-AS1	Q494R0	122 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CDKL4	Q5MAI5	379 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ULK3	Q6PHR2	472 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	FBXW12	Q6X9E4	464 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OR10AD1	Q8NGE0	317 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OR1J4	Q8NGS1	313 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	STAG3L4	Q8TBR4	150 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OR51E1	Q8TCB6	317 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CDKL2	Q92772	493 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RAB1C	Q92928	201 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ISOC2	Q96AB3	205 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	GALNT14	Q96FL9	552 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RBBP8	Q99708	897 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SLC25A2	Q9BXI2	301 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CXorf21	Q9HAI6	301 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	POPDC3	Q9HBV1	291 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	C15orf41	Q9Y2V0	281 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	WIF1	Q9Y5W5	379 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	USF3	Q68DE3	2245 aa		4.35	□□□□□ -1.71
SMARCA2-238	ENST00000635273	NOTCH3	Q9UM47	2321 aa		4.34	□□□□□ -1.71
SMARCA2-238	ENST00000635273	IGLV11-55	A0A075B6I3	123 aa		4.34	□□□□□ -1.71
SMARCA2-238	ENST00000635273	TRAV6	A0A075B6T7	132 aa		4.34	□□□□□ -1.71
SMARCA2-238	ENST00000635273		A0A0A6YYD5	115 aa		4.34	□□□□□ -1.71
SMARCA2-238	ENST00000635273		A0A1B0GVY2	172 aa		4.34	□□□□□ -1.71
SMARCA2-238	ENST00000635273	NME4	O00746	187 aa		4.34	□□□□□ -1.71
SMARCA2-238	ENST00000635273	REM1	O75628	298 aa		4.34	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RCBTB2	O95199	551 aa		4.34	□□□□□ -1.71
SMARCA2-238	ENST00000635273	HPRT1	P00492	218 aa		4.34	□□□□□ -1.71
SMARCA2-238	ENST00000635273	GFAP	P14136	432 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms