RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 UBE2NLQ5JXB2 153 aa15.31■□□□□ 0.04
PNKP-224ENST00000631020 SLC35E4Q6ICL7 350 aa15.31■□□□□ 0.04
PNKP-224ENST00000631020 ZNF497Q6ZNH5 498 aa15.31■□□□□ 0.04
PNKP-224ENST00000631020 FAM185AQ8N0U4 392 aa15.31■□□□□ 0.04
PNKP-224ENST00000631020 DTX3Q8N9I9 347 aa15.31■□□□□ 0.04
PNKP-224ENST00000631020 SUCNR1Q9BXA5 334 aa15.31■□□□□ 0.04
PNKP-224ENST00000631020 ZMAT3Q9HA38 289 aaKnown RBP15.31■□□□□ 0.04
PNKP-224ENST00000631020 TRAV39A0A0B4J263 110 aa15.3■□□□□ 0.04
PNKP-224ENST00000631020 A0A1W2PQ09 198 aa15.3■□□□□ 0.04
PNKP-224ENST00000631020 ODAMA1E959 279 aa15.3■□□□□ 0.04
PNKP-224ENST00000631020 MT-ND4P03905 459 aa15.3■□□□□ 0.04
PNKP-224ENST00000631020 GNB3P16520 340 aa15.3■□□□□ 0.04
PNKP-224ENST00000631020 ELK1P19419 428 aa15.3■□□□□ 0.04
PNKP-224ENST00000631020 ETV6P41212 452 aa15.3■□□□□ 0.04
PNKP-224ENST00000631020 MEF2CQ06413 473 aaPredicted RBP15.3■□□□□ 0.04
PNKP-224ENST00000631020 MZT2AQ6P582 158 aa15.3■□□□□ 0.04
PNKP-224ENST00000631020 GAPTQ8N292 157 aa15.3■□□□□ 0.04
PNKP-224ENST00000631020 AK3Q9UIJ7 227 aa15.3■□□□□ 0.04
PNKP-224ENST00000631020 ELF5Q9UKW6 265 aaPredicted RBP15.3■□□□□ 0.04
PNKP-224ENST00000631020 MEIKINA0A087WXM9 373 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 MFNGO00587 321 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 LIPFP07098 398 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 HIST1H1DP16402 221 aaKnown RBP15.29■□□□□ 0.04
PNKP-224ENST00000631020 CCL3L1P16619 93 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 CDK2P24941 298 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 FPR2P25090 351 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 ERVFRD-1P60508 538 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 ARF6P62330 175 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 TUSC1Q2TAM9 212 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 Q6ZPA2 131 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 C11orf42Q8N5U0 333 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 CMTM3Q96MX0 182 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 MIXL1Q9H2W2 232 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 NCOR1P1Q9H4R4 102 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 AUP1Q9Y679 476 aa15.29■□□□□ 0.04
PNKP-224ENST00000631020 hADV38S2A0JD32 116 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 TMEM30CPA0ZSE6 113 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 TRIM77I1YAP6 450 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 APOA1P02647 267 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 DLX6P56179 175 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 CDNFQ49AH0 187 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 BTNL3Q6UXE8 466 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 Q8N7P7 452 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.28■□□□□ 0.04
PNKP-224ENST00000631020 OR13A1Q8NGR1 328 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 FAM216AQ8WUB2 273 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 CORO2AQ92828 525 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 S100A16Q96FQ6 103 aaKnown RBP15.28■□□□□ 0.04
PNKP-224ENST00000631020 DMRTB1Q96MA1 342 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 HDHD3Q9BSH5 251 aaPredicted RBP15.28■□□□□ 0.04
PNKP-224ENST00000631020 CCDC32Q9BV29 185 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 LINC00312Q9Y6C7 94 aa15.28■□□□□ 0.04
PNKP-224ENST00000631020 TRAV18A0A075B6X5 111 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 CA11O75493 328 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 CGB3P0DN86 165 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 CGB7P0DN87 165 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 ZNF260Q3ZCT1 412 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 IZUMO1Q8IYV9 350 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 OR4K15Q8NH41 348 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 MRPL30Q8TCC3 161 aaKnown RBP15.27■□□□□ 0.04
PNKP-224ENST00000631020 CCDC107Q8WV48 283 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 SIRPDQ9H106 197 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.27■□□□□ 0.04
PNKP-224ENST00000631020 DIABLOQ9NR28 239 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 ONECUT1Q9UBC0 465 aa15.27■□□□□ 0.04
PNKP-224ENST00000631020 A0A0A6YYH2 397 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 A6NJ64 397 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 XRCC3O43542 346 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 SCGNO76038 276 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 PTTG1O95997 202 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 NAPSAO96009 420 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 MMP9P14780 707 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 LAX1Q8IWV1 398 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 PHF21AQ96BD5 680 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 WDFY2Q96P53 400 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 SLC6A7Q99884 636 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 ABCB10Q9NRK6 738 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 NUP50Q9UKX7 468 aa15.27■□□□□ 0.03
PNKP-224ENST00000631020 UBE2J1Q9Y385 318 aaPredicted RBP15.27■□□□□ 0.03
PNKP-224ENST00000631020 TRGV10A0A0A0MS01 117 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 RGS5O15539 181 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 ZNF728P0DKX0 622 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 RCC1P18754 421 aaPredicted RBP15.26■□□□□ 0.03
PNKP-224ENST00000631020 DLX1P56177 255 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 C17orf58Q2M2W7 97 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 TRAPPC6BQ86SZ2 158 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 LYSMD2Q8IV50 215 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 KIR3DL3Q8N743 410 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 MRGPRDQ8TDS7 321 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 OR6C3Q9NZP0 311 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 KPTNQ9Y664 436 aa15.26■□□□□ 0.03
PNKP-224ENST00000631020 TMEM235A6NFC5 223 aa15.25■□□□□ 0.03
PNKP-224ENST00000631020 SERPINE3A8MV23 424 aa15.25■□□□□ 0.03
PNKP-224ENST00000631020 C17orf98A8MV24 154 aa15.25■□□□□ 0.03
PNKP-224ENST00000631020 PTHLHP12272 177 aa15.25■□□□□ 0.03
PNKP-224ENST00000631020 GLP1RP43220 463 aa15.25■□□□□ 0.03
PNKP-224ENST00000631020 COMPP49747 757 aaPredicted RBP15.25■□□□□ 0.03
PNKP-224ENST00000631020 C1orf122Q6ZSJ8 110 aa15.25■□□□□ 0.03
PNKP-224ENST00000631020 C5orf24Q7Z6I8 188 aa15.25■□□□□ 0.03
PNKP-224ENST00000631020 ZNF565Q8N9K5 539 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms