RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 NAP1L5Q96NT1 182 aaPredicted RBP0.69□□□□□ -2.3
SRP54-214ENST00000630962 RETNLBQ9BQ08 111 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 MND1Q9BWT6 205 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 SPZ1Q9BXG8 430 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 ALX4Q9H161 411 aaPredicted RBP0.69□□□□□ -2.3
SRP54-214ENST00000630962 SOX21Q9Y651 276 aaPredicted RBP0.69□□□□□ -2.3
SRP54-214ENST00000630962 TENM3Q9P273 2699 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 E7EWF7 191 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 F8W036 122 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 H3BP45 60 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 PDCD6O75340 191 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 FBP1P09467 338 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 PRKACAP17612 351 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 PEX19P40855 299 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 PLTPP55058 493 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 OR2B6P58173 313 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 HBG1P69891 147 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 HBG2P69892 147 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 STX4Q12846 297 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 MALRD1Q5VYJ5 2156 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 ZFAND2AQ8N6M9 145 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 ZNF283Q8N7M2 679 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 GPR22Q99680 433 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 FAAP24Q9BTP7 215 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 FIS1Q9Y3D6 152 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 NOTCH1P46531 2555 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 KDM5BQ9UGL1 1544 aa0.68□□□□□ -2.3
SRP54-214ENST00000630962 DENND4BO75064 1496 aaPredicted RBP0.67□□□□□ -2.3
SRP54-214ENST00000630962 COL6A6A6NMZ7 2263 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 ZNF638Q14966 1978 aaKnown RBP0.67□□□□□ -2.3
SRP54-214ENST00000630962 IGKV2-40A0A087WW87 121 aaPredicted RBP0.67□□□□□ -2.3
SRP54-214ENST00000630962 DHRS12A0PJE2 317 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 FAM183AA6NL82 134 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 H0YIV9 168 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 AKR7A2O43488 359 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 ZMPSTE24O75844 475 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 LTAP01374 205 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 IGKV2D-40P01614 121 aaPredicted RBP0.67□□□□□ -2.3
SRP54-214ENST00000630962 CRYGDP07320 174 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 M6PRP20645 277 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 HINT1P49773 126 aaPredicted RBP0.67□□□□□ -2.3
SRP54-214ENST00000630962 BCAP31P51572 246 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 LAMTOR1Q6IAA8 161 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 OR52K2Q8NGK3 314 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 ZNRF2Q8NHG8 242 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 CLHC1Q8NHS4 586 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 TM6SF2Q9BZW4 377 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 KPTNQ9Y664 436 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 MTCH2Q9Y6C9 303 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 MINOS1-NBL1R4GNA1 71 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 TRPM6Q9BX84 2022 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 CACNA1SQ13698 1873 aa0.67□□□□□ -2.3
SRP54-214ENST00000630962 IGHV3-15A0A0B4J1V0 119 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 UBFD1O14562 309 aaKnown RBP0.66□□□□□ -2.3
SRP54-214ENST00000630962 IGHV3-30-3P0DP02 117 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 ZNF3P17036 446 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 RPA3P35244 121 aaPredicted RBP0.66□□□□□ -2.3
SRP54-214ENST00000630962 DNASE1L1P49184 302 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 BAXQ07812 192 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 UAP1Q16222 522 aaPredicted RBP0.66□□□□□ -2.3
SRP54-214ENST00000630962 NDUFAF6Q330K2 333 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 HIKESHIQ53FT3 197 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 TIMM23BQ5SRD1 257 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 FAM162BQ5T6X4 162 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 Q6ZRN7 208 aaPredicted RBP0.66□□□□□ -2.3
SRP54-214ENST00000630962 Q6ZTI0 123 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 COA5Q86WW8 74 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 SPICQ8N5J4 248 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 OR8G5Q8NG78 346 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 OR4K17Q8NGC6 315 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 OR51L1Q8NGJ5 315 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 C16orf78Q8WTQ4 265 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 CDKL2Q92772 493 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 GALMQ96C23 342 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 TAPBPLQ9BX59 468 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 EBPLQ9BY08 206 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 SYT4Q9H2B2 425 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 METTL8Q9H825 291 aaKnown RBP0.66□□□□□ -2.3
SRP54-214ENST00000630962 PRO2289Q9P1D8 64 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 AMMECR1Q9Y4X0 333 aaPredicted RBP0.66□□□□□ -2.3
SRP54-214ENST00000630962 ALG5Q9Y673 324 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 NCKAP5O14513 1909 aa0.66□□□□□ -2.3
SRP54-214ENST00000630962 CLUHO75153 1309 aa0.65□□□□□ -2.3
SRP54-214ENST00000630962 NYNRINQ9P2P1 1898 aaKnown RBP0.65□□□□□ -2.3
SRP54-214ENST00000630962 TRAV8-2A0A0B4J237 113 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 GRIFINA4D1Z8 144 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 TMEM235A6NFC5 223 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 TRIM64CA6NLI5 447 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 H3BPC8 53 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 H3BSA7 217 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 BOLA2-SMG1P6H3BVE0 249 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 J3QQQ9 107 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 SNAI1O95863 264 aaPredicted RBP0.65□□□□□ -2.31
SRP54-214ENST00000630962 ALOX5APP20292 161 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 CD200P41217 278 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 RPL26P61254 145 aaKnown RBP0.65□□□□□ -2.31
SRP54-214ENST00000630962 PAFAH1B3Q15102 231 aaKnown RBP0.65□□□□□ -2.31
SRP54-214ENST00000630962 CLEC20AQ6ZU45 233 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 TRIML2Q8N7C3 387 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 OR4X2Q8NGF9 303 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms