RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TUBA4BQ9H853 241 aa10.66□□□□□ -0.7
SNX1-214ENST00000625244 GPR84Q9NQS5 396 aa10.66□□□□□ -0.7
SNX1-214ENST00000625244 MRPS18AQ9NVS2 196 aaKnown RBP10.66□□□□□ -0.7
SNX1-214ENST00000625244 R4GMQ9 66 aa10.66□□□□□ -0.7
SNX1-214ENST00000625244 A0A0U1RQV5 110 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 RPP14O95059 124 aaKnown RBP10.65□□□□□ -0.7
SNX1-214ENST00000625244 IGHV3-7P01780 117 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 ATP6V1B1P15313 513 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 DCKP27707 260 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 DUSP1P28562 367 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 KIR3DL2P43630 455 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 IL24Q13007 206 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 EBI3Q14213 229 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 GALEQ14376 348 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 STX19Q8N4C7 294 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 BPIFB6Q8NFQ5 453 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 OR52I1Q8NGK6 324 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 OR9G1Q8NH87 305 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 OR51E1Q8TCB6 317 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 HAVCR2Q8TDQ0 301 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 EAF1Q96JC9 268 aaPredicted RBP10.65□□□□□ -0.7
SNX1-214ENST00000625244 CEP19Q96LK0 163 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 CNBD2Q96M20 576 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 OR4C12Q96R67 309 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 ALG8Q9BVK2 526 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 PKIBQ9C010 78 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 TAS2R3Q9NYW6 316 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 CNOT2Q9NZN8 540 aaKnown RBP10.65□□□□□ -0.7
SNX1-214ENST00000625244 MRM2Q9UI43 246 aaKnown RBP10.65□□□□□ -0.7
SNX1-214ENST00000625244 SNX5Q9Y5X3 404 aa10.65□□□□□ -0.7
SNX1-214ENST00000625244 IGHV3-72A0A0B4J1Y9 119 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 LINC01619G3V211 115 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 IGLV1-51P01701 117 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 IGLV3-1P01715 115 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 MED14OSP0DP75 135 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 NFYBP25208 207 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 ZP1P60852 638 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 ZNF85Q03923 595 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 MRPL28Q13084 256 aaKnown RBP10.64□□□□□ -0.71
SNX1-214ENST00000625244 PMS2P11Q13670 270 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 TP53I3Q53FA7 332 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 CLVS2Q5SYC1 327 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 TMEM42Q69YG0 159 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 TMEM65Q6PI78 240 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 TMPRSS11AQ6ZMR5 421 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 SSX6Q7RTT6 188 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 LHFPL3Q86UP9 236 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 OR8H3Q8N146 312 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 Q8N6K4 173 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 OR4D6Q8NGJ1 314 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 LEAP2Q969E1 77 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 SLAMF9Q96A28 289 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 TMEM80Q96HE8 168 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 C4orf36Q96KX1 117 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 PBOV1Q9GZY1 135 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 FGF20Q9NP95 211 aaPredicted RBP10.64□□□□□ -0.71
SNX1-214ENST00000625244 PLSCR3Q9NRY6 295 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 PLCXD1Q9NUJ7 323 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 FAM206AQ9NX38 181 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 BLOC1S6Q9UL45 172 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 MYRFQ9Y2G1 1151 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 EXOSC1Q9Y3B2 195 aaKnown RBP10.64□□□□□ -0.71
SNX1-214ENST00000625244 TPRKBQ9Y3C4 175 aa10.64□□□□□ -0.71
SNX1-214ENST00000625244 AMMECR1Q9Y4X0 333 aaPredicted RBP10.64□□□□□ -0.71
SNX1-214ENST00000625244 A6NIN4 97 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 J3QLW9 94 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 J3QR06 171 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 J3QRE1 110 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 MAGEB4O15481 346 aaPredicted RBP10.63□□□□□ -0.71
SNX1-214ENST00000625244 IGF1P05019 195 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 HTR1AP08908 422 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 ZNF19P17023 458 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 PPIFP30405 207 aaKnown RBP10.63□□□□□ -0.71
SNX1-214ENST00000625244 GLIPR1P48060 266 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 RAB7AP51149 207 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 GBX2P52951 348 aaPredicted RBP10.63□□□□□ -0.71
SNX1-214ENST00000625244 PITPNAQ00169 270 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 MADCAM1Q13477 382 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 C17orf58Q2M2W7 97 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 C6orf141Q5SZD1 244 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 LINC00322Q6ZN03 302 aaPredicted RBP10.63□□□□□ -0.71
SNX1-214ENST00000625244 AHSA2Q719I0 299 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 SYS1Q8N2H4 156 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 FBLIM1Q8WUP2 373 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 TPSG1Q9NRR2 321 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 ERVK13-1Q9NX77 482 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 NUFIP1Q9UHK0 495 aaKnown RBP10.63□□□□□ -0.71
SNX1-214ENST00000625244 OR52A1Q9UKL2 312 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 DIMT1Q9UNQ2 313 aaKnown RBP10.63□□□□□ -0.71
SNX1-214ENST00000625244 CEPT1Q9Y6K0 416 aa10.63□□□□□ -0.71
SNX1-214ENST00000625244 IGHV4OR15-8A0A075B7B6 117 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 A0A087WW49 117 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 CXorf65A6NEN9 183 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 PRR32B1ATL7 298 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 MYL12BO14950 172 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 IGLV1-40P01703 118 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 RPSAP08865 295 aaKnown RBP10.62□□□□□ -0.71
SNX1-214ENST00000625244 PTGFRP43088 359 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 AESQ08117 197 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 ST3GAL4Q11206 333 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms