RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 MARS2Q96GW9 593 aaKnown RBP5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 SMIM8Q96KF7 97 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 SNX22Q96L94 193 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 MAP1LC3BQ9GZQ8 125 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 RIMS4Q9H426 269 aaPredicted RBP5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 PATZ1Q9HBE1 687 aaKnown RBP5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 LIN7CQ9NUP9 197 aaKnown RBP5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 POLDIP2Q9Y2S7 368 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 RPL36A-HNRNPH2H7BZ11 118 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 CLDN34H7C241 214 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 CDIPTO14735 213 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 SYNGR2O43760 224 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 ZIC3O60481 467 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 SRSF10O75494 262 aaKnown RBP5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 RND3P61587 244 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 ALKBH6Q3KRA9 238 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 NSUN5P2Q63ZY6 315 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF880Q6PDB4 577 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 M1APQ8TC57 530 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 DNASE2BQ8WZ79 361 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 TMEM222Q9H0R3 208 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 WNT5BQ9H1J7 359 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF665Q9H7R5 613 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 PLEKHA3Q9HB20 300 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 AURKAIP1Q9NWT8 199 aaPredicted RBP5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 IL36RNQ9UBH0 155 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 XIRP2A4UGR9 3374 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 ATG2AQ2TAZ0 1938 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 LYZL6O75951 148 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 SMIM6P0DI80 62 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 FGF7P21781 194 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 OR3A1P47881 315 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 SLC38A11Q08AI6 406 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 PRAMEF5Q5TYX0 476 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 PRAMEF6Q5VXH4 476 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 DNM1P46Q6ZS02 220 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 DEFB108BQ8NET1 73 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 OR13D1Q8NGV5 346 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 LILRB1Q8NHL6 650 aaPredicted RBP5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 CT55Q8WUE5 264 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 RAB40CQ96S21 281 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 FAM173AQ9BQD7 235 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 HES7Q9BYE0 225 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 TWSG1Q9GZX9 223 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 SERTAD4Q9NUC0 356 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 HSF4Q9ULV5 492 aa5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 TIMM8BQ9Y5J9 83 aaPredicted RBP5.93□□□□□ -1.46
SYNPO2-206ENST00000610556 CACNA1HO95180 2353 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 APC2O95996 2303 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF106Q9H2Y7 1883 aaKnown RBP5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 C3orf80F5H4A9 247 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 YKT6O15498 198 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 PDGFBP01127 241 aaPredicted RBP5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 HEXAP06865 529 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 TMEM41BQ5BJD5 291 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 BTNL3Q6UXE8 466 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF66Q6ZN08 573 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF818PQ6ZRF7 136 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 OR4A16Q8NH70 328 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 TECTBQ96PL2 329 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 ATP5SQ99766 215 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 ARRDC1-AS1Q9H2J1 176 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 FBLN5Q9UBX5 448 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 IGSF23A1L1A6 192 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 LRP5LA4QPB2 252 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 C9JQL5 133 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 TRGC2P03986 189 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 FAM157CP0CG43 387 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 COX6A1P12074 109 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 CSRP1P21291 193 aaKnown RBP5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 SELENOVP59797 346 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 ERVS71-1P61550 626 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 RPL19P84098 196 aaKnown RBP5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 IL24Q13007 206 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 BTNL8Q6UX41 500 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 TMPRSS7Q7RTY8 843 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 FAM89BQ8N5H3 189 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 SAP25Q8TEE9 199 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 TM2D1Q9BX74 207 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 WDR54Q9H977 334 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 SLC22A20A6NK97 555 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 ATXN7O15265 892 aaPredicted RBP5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF737O75373 536 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 F2RP25116 425 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 CHRNA7P36544 502 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 SUCLG1P53597 346 aaKnown RBP5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 C10orf128Q5T292 105 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 KCNIP4Q6PIL6 250 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 LHFPL1Q86WI0 220 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 TPRX1Q8N7U7 411 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 MRGPRDQ8TDS7 321 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 GALMQ96C23 342 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 OR2D2Q9H210 308 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 BARX1Q9HBU1 254 aaPredicted RBP5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 OR2W1Q9Y3N9 320 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 V9GYS6 101 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 CHD9Q3L8U1 2897 aa5.92□□□□□ -1.46
SYNPO2-206ENST00000610556 UNC80Q8N2C7 3258 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 FER1L5A0AVI2 2057 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 DBX1A6NMT0 343 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms