RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 CDRT1O95170 752 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 HTR3BO95264 441 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 PF4P02776 101 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 CSTBP04080 98 aaKnown RBP13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 BCL3P20749 454 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 GPR176Q14439 515 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 GLIPR1L1Q6UWM5 242 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 TCF23Q7RTU1 214 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 CENPVQ7Z7K6 275 aaPredicted RBP13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 ANKRD13BQ86YJ7 626 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 CLVS1Q8IUQ0 354 aaPredicted RBP13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 RNF167Q9H6Y7 350 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 RHOFQ9HBH0 211 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 GLS2Q9UI32 602 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 IGKV1-12A0A0C4DH73 117 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 ZNF780AO75290 641 aaPredicted RBP13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 ZNF737O75373 536 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 KDM4BO94953 1096 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 IGKV1D-12P01611 117 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 RBP4P02753 201 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 PRKACAP17612 351 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 CD24P25063 80 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 HTR2CP28335 458 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 SDC2P34741 201 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 NPBWR2P48146 333 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 ERVK11-1P61568 191 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 COL10A1Q03692 680 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 MXD1Q05195 221 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 RAB11BQ15907 218 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 C1orf100Q5SVJ3 147 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 FAM58AQ8N1B3 248 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 LINC00482Q8N8I6 264 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 OR6M1Q8NGM8 313 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 TENM2Q9NT68 2774 aa13.12□□□□□ -0.31
SHKBP1-215ENST00000597649 SHISA3A0PJX4 238 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 F8VVB4 439 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 F8VWA3 439 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 UBBP0CG47 229 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 CALCBP10092 127 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 SNU13P55769 128 aaKnown RBP13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 SLC22A6Q4U2R8 563 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 HES5Q5TA89 166 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 MINOS1Q5TGZ0 78 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 ASCL4Q6XD76 172 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 OR4D6Q8NGJ1 314 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 OR10K1Q8NGX5 313 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 GHRLQ9UBU3 117 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 MINOS1-NBL1R4GNA1 71 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 BIRC6Q9NR09 4857 aa13.11□□□□□ -0.31
SHKBP1-215ENST00000597649 LYSTQ99698 3801 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 SMIM30A4D0T7 59 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 SH2D7A6NKC9 451 aaPredicted RBP13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 SLC17A2O00624 439 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 DUS4LO95620 317 aaKnown RBP13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 AMY1AP04745 511 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 AMY2AP04746 511 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 LPLP06858 475 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 SERPINA2P20848 420 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 SERPINB10P48595 397 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 EDDM3BP56851 147 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 OR10A3P58181 314 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 VBP1P61758 197 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 ETV3LQ6ZN32 361 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 LYPD6Q86Y78 171 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 ASCC1Q8N9N2 400 aaKnown RBP13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 GFI1Q99684 422 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 NAA50Q9GZZ1 169 aaKnown RBP13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 CST11Q9H112 138 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 HMG20AQ9NP66 347 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 IL36GQ9NZH8 169 aa13.1□□□□□ -0.31
SHKBP1-215ENST00000597649 DSCAML1Q8TD84 2053 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 IGHV2-26A0A0B4J1V2 119 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 TMEM82A0PJX8 343 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 CCDC160A6NGH7 325 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 NOTOA8MTQ0 251 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 SH2D1BO14796 132 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 SLC22A1O15245 554 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 CRTAPO75718 401 aaPredicted RBP13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 MMP23AO75900 390 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 GABARAPO95166 117 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 GTF2F2P13984 249 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 TGFBR1P36897 503 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 NCS1P62166 190 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 P2RY14Q15391 338 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 ABCA11PQ4W5N1 156 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 SPIN3Q5JUX0 258 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 ELP2Q6IA86 826 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 BAIAP2L2Q6UXY1 529 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 SLC16A12Q6ZSM3 486 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 MRPL41Q8IXM3 137 aaKnown RBP13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 OSR2Q8N2R0 312 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 NDNFQ8TB73 568 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 RAB2BQ8WUD1 216 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 STEAP1Q9UHE8 339 aa13.09□□□□□ -0.31
SHKBP1-215ENST00000597649 IFITM5A6NNB3 132 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 BPNT1O95861 308 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 IL1AP01583 271 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 CLEC2LP0C7M8 214 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 CD37P11049 281 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms