RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 GHSRQ92847 366 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 COQ2Q96H96 371 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 RCHY1Q96PM5 261 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 FAM192AQ9GZU8 254 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 IFT22Q9H7X7 185 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 TRBV5-5A0A0J9YX44 114 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 KBTBD11-OT1A0A1B0GTJ5 212 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 LEUTXA8MZ59 168 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 OOSP1A8MZH6 123 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 CSTBP04080 98 aaKnown RBP13.64□□□□□ -0.23
RETREG3-210ENST00000590541 CD1AP06126 327 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 LYL1P12980 280 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 C21orf33P30042 268 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-210ENST00000590541 ECI1P42126 302 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 RAB25P57735 213 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 RIPK1Q13546 671 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 GPR176Q14439 515 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 DDI2Q5TDH0 399 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 ZNF695Q8IW36 515 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 CHPT1Q8WUD6 406 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 NR1H4Q96RI1 486 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-210ENST00000590541 DCLRE1BQ9H816 532 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 CLEC2DQ9UHP7 191 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 SCOCQ9UIL1 159 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 MOB4Q9Y3A3 225 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 SIRT4Q9Y6E7 314 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-210ENST00000590541 STARD9Q9P2P6 4700 aa13.64□□□□□ -0.23
RETREG3-210ENST00000590541 FAM172BPA6NC97 362 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 CCL24O00175 119 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 TOR1AO14656 332 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 HTR3BO95264 441 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 IGFBP3P17936 291 aaPredicted RBP13.63□□□□□ -0.23
RETREG3-210ENST00000590541 FSTP19883 344 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 ATXN7L3Q14CW9 347 aaPredicted RBP13.63□□□□□ -0.23
RETREG3-210ENST00000590541 C9orf66Q5T8R8 295 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 PRAMEF5Q5TYX0 476 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 SBSPONQ8IVN8 264 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 CDH26Q8IXH8 852 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 STX19Q8N4C7 294 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 OR10A7Q8NGE5 316 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 FBLIM1Q8WUP2 373 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 KRTAP17-1Q9BYP8 105 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 PSORS1C1Q9UIG5 152 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 LINC00527Q9UJ94 153 aa13.63□□□□□ -0.23
RETREG3-210ENST00000590541 HYDINQ4G0P3 5121 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 MEIKINA0A087WXM9 373 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 TRAV24A0A0B4J272 114 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 LY6LH3BQJ8 138 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 MYL12BO14950 172 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 LALBAP00709 142 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 CGB3P0DN86 165 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 CGB7P0DN87 165 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 GDNFP39905 211 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 RBM11P57052 281 aaKnown RBP13.62□□□□□ -0.23
RETREG3-210ENST00000590541 MPV17LQ2QL34 196 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 HLA-DRB5Q30154 266 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 TPTE2P1Q5T6R2 138 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 CCDC144NLQ6NUI1 221 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 SLC16A12Q6ZSM3 486 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 PGLYRP3Q96LB9 341 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 ZNF286AQ9HBT8 521 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 ING4Q9UNL4 249 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 ST3GAL6Q9Y274 331 aa13.62□□□□□ -0.23
RETREG3-210ENST00000590541 FAM90A18PA6NE21 464 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 FAM90A16PA6NEW6 464 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 FAM90A20PA6NIJ5 464 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 FAM90A9PA6NNJ1 464 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 FAM90A12PA8MX19 464 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 FAM90A5PA8MXJ8 464 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 BUB1B-PAK6H3BSN5 160 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 GNAO1P09471 354 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 FAM90A15PP0C7V4 464 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 FAM90A13PP0C7W8 464 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 FAM90A14PP0C7W9 464 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 FAM90A24PP0C7X0 464 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 GTF2F2P13984 249 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 GZMHP20718 246 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 MAPK3P27361 379 aaPredicted RBP13.61□□□□□ -0.23
RETREG3-210ENST00000590541 WNT4P56705 351 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 RPS11P62280 158 aaKnown RBP eCLIP13.61□□□□□ -0.23
RETREG3-210ENST00000590541 C17orf58Q2M2W7 97 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 PIGYQ3MUY2 71 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 COMMD1Q8N668 190 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 OR5M8Q8NGP6 311 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 OR10K1Q8NGX5 313 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 OR9G1Q8NH87 305 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 MRPS24Q96EL2 167 aaKnown RBP13.61□□□□□ -0.23
RETREG3-210ENST00000590541 ZNF184Q99676 751 aaPredicted RBP13.61□□□□□ -0.23
RETREG3-210ENST00000590541 PPIL3Q9H2H8 161 aaKnown RBP13.61□□□□□ -0.23
RETREG3-210ENST00000590541 PALMDQ9NP74 551 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 KIF25Q9UIL4 384 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 ERGIC3Q9Y282 383 aa13.61□□□□□ -0.23
RETREG3-210ENST00000590541 AMMECR1Q9Y4X0 333 aaPredicted RBP13.61□□□□□ -0.23
RETREG3-210ENST00000590541 TRBV5-7A0A0A0MS05 114 aa13.6□□□□□ -0.23
RETREG3-210ENST00000590541 SERPINE3A8MV23 424 aa13.6□□□□□ -0.23
RETREG3-210ENST00000590541 HSPB6O14558 160 aa13.6□□□□□ -0.23
RETREG3-210ENST00000590541 OR7C1O76099 320 aaPredicted RBP13.6□□□□□ -0.23
RETREG3-210ENST00000590541 CDRT1O95170 752 aa13.6□□□□□ -0.23
RETREG3-210ENST00000590541 IL1AP01583 271 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms