RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ZNF83P51522 516 aa8.79□□□□□ -1
VPS25-203ENST00000589520 CASP6P55212 293 aa8.79□□□□□ -1
VPS25-203ENST00000589520 KLF3P57682 345 aaPredicted RBP8.79□□□□□ -1
VPS25-203ENST00000589520 HMGN3Q15651 99 aa8.79□□□□□ -1
VPS25-203ENST00000589520 MSMO1Q15800 293 aa8.79□□□□□ -1
VPS25-203ENST00000589520 LRRC37A5PQ49AS3 106 aa8.79□□□□□ -1
VPS25-203ENST00000589520 IGSF11Q5DX21 431 aa8.79□□□□□ -1
VPS25-203ENST00000589520 C6orf183Q5T699 404 aa8.79□□□□□ -1
VPS25-203ENST00000589520 PCSK4Q6UW60 755 aa8.79□□□□□ -1
VPS25-203ENST00000589520 TMEM108Q6UXF1 575 aa8.79□□□□□ -1
VPS25-203ENST00000589520 WDR82Q6UXN9 313 aa8.79□□□□□ -1
VPS25-203ENST00000589520 ACP7Q6ZNF0 438 aa8.79□□□□□ -1
VPS25-203ENST00000589520 Q6ZPA2 131 aa8.79□□□□□ -1
VPS25-203ENST00000589520 H1FOOQ8IZA3 346 aaPredicted RBP8.79□□□□□ -1
VPS25-203ENST00000589520 BATF2Q8N1L9 274 aa8.79□□□□□ -1
VPS25-203ENST00000589520 Q8NA96 180 aa8.79□□□□□ -1
VPS25-203ENST00000589520 ZBTB34Q8NCN2 500 aa8.79□□□□□ -1
VPS25-203ENST00000589520 DCUN1D4Q92564 292 aa8.79□□□□□ -1
VPS25-203ENST00000589520 MSI2Q96DH6 328 aaKnown RBP8.79□□□□□ -1
VPS25-203ENST00000589520 ABHD14BQ96IU4 210 aa8.79□□□□□ -1
VPS25-203ENST00000589520 AQP10Q96PS8 301 aa8.79□□□□□ -1
VPS25-203ENST00000589520 DIRC2Q96SL1 478 aa8.79□□□□□ -1
VPS25-203ENST00000589520 RNF126Q9BV68 326 aa8.79□□□□□ -1
VPS25-203ENST00000589520 SLC5A7Q9GZV3 580 aa8.79□□□□□ -1
VPS25-203ENST00000589520 NCOR1P1Q9H4R4 102 aa8.79□□□□□ -1
VPS25-203ENST00000589520 PLEKHA2Q9HB19 425 aa8.79□□□□□ -1
VPS25-203ENST00000589520 NGBQ9NPG2 151 aa8.79□□□□□ -1
VPS25-203ENST00000589520 MBD2Q9UBB5 411 aa8.79□□□□□ -1
VPS25-203ENST00000589520 IL36RNQ9UBH0 155 aa8.79□□□□□ -1
VPS25-203ENST00000589520 TRAPPC2LQ9UL33 140 aa8.79□□□□□ -1
VPS25-203ENST00000589520 ANKRD17O75179 2603 aaKnown RBP8.79□□□□□ -1
VPS25-203ENST00000589520 KALRNO60229 2985 aa8.78□□□□□ -1
VPS25-203ENST00000589520 A0A0G2JNJ9 132 aa8.78□□□□□ -1
VPS25-203ENST00000589520 RNF222A6NCQ9 220 aa8.78□□□□□ -1
VPS25-203ENST00000589520 OOEPA6NGQ2 149 aa8.78□□□□□ -1
VPS25-203ENST00000589520 A6NLC8 198 aa8.78□□□□□ -1
VPS25-203ENST00000589520 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.78□□□□□ -1
VPS25-203ENST00000589520 SIRPB1O00241 398 aa8.78□□□□□ -1
VPS25-203ENST00000589520 BET1O15155 118 aa8.78□□□□□ -1
VPS25-203ENST00000589520 PHF1O43189 567 aaPredicted RBP8.78□□□□□ -1
VPS25-203ENST00000589520 CDS2O95674 445 aa8.78□□□□□ -1
VPS25-203ENST00000589520 BMP5P22003 454 aa8.78□□□□□ -1
VPS25-203ENST00000589520 GATA4P43694 442 aa8.78□□□□□ -1
VPS25-203ENST00000589520 LUMP51884 338 aaPredicted RBP8.78□□□□□ -1
VPS25-203ENST00000589520 IAH1Q2TAA2 248 aaPredicted RBP8.78□□□□□ -1
VPS25-203ENST00000589520 GGNBP1Q5YKI7 109 aa8.78□□□□□ -1
VPS25-203ENST00000589520 Q6ZR03 302 aa8.78□□□□□ -1
VPS25-203ENST00000589520 BVESQ8NE79 360 aa8.78□□□□□ -1
VPS25-203ENST00000589520 OR10V1Q8NGI7 309 aa8.78□□□□□ -1
VPS25-203ENST00000589520 STOML3Q8TAV4 291 aa8.78□□□□□ -1
VPS25-203ENST00000589520 GLYATL2Q8WU03 294 aa8.78□□□□□ -1
VPS25-203ENST00000589520 ZCCHC14Q8WYQ9 949 aaKnown RBP8.78□□□□□ -1
VPS25-203ENST00000589520 ST8SIA2Q92186 375 aa8.78□□□□□ -1
VPS25-203ENST00000589520 SNRNP40Q96DI7 357 aaKnown RBP8.78□□□□□ -1
VPS25-203ENST00000589520 CYYR1Q96J86 154 aa8.78□□□□□ -1
VPS25-203ENST00000589520 OR10C1Q96KK4 312 aa8.78□□□□□ -1
VPS25-203ENST00000589520 VKORC1Q9BQB6 163 aa8.78□□□□□ -1
VPS25-203ENST00000589520 TMEM222Q9H0R3 208 aa8.78□□□□□ -1
VPS25-203ENST00000589520 RAB9BQ9NP90 201 aa8.78□□□□□ -1
VPS25-203ENST00000589520 GSKIPQ9P0R6 139 aa8.78□□□□□ -1
VPS25-203ENST00000589520 LUZP4Q9P127 313 aa8.78□□□□□ -1
VPS25-203ENST00000589520 Q9UFV3 132 aa8.78□□□□□ -1
VPS25-203ENST00000589520 ZDHHC8Q9ULC8 765 aa8.78□□□□□ -1
VPS25-203ENST00000589520 UBE2J1Q9Y385 318 aaPredicted RBP8.78□□□□□ -1
VPS25-203ENST00000589520 TEX15Q9BXT5 2789 aa8.78□□□□□ -1
VPS25-203ENST00000589520 FREM2Q5SZK8 3169 aa8.77□□□□□ -1
VPS25-203ENST00000589520 RPS10-NUDT3A0A1W2PQS6 291 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 ANKRD34BA5PLL1 514 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 RNF212BA8MTL3 300 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 E5RGE8 158 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 F5H0A9 414 aaPredicted RBP8.77□□□□□ -1.01
VPS25-203ENST00000589520 H0Y980 276 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 HSPB6O14558 160 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 CFDP00746 253 aaPredicted RBP8.77□□□□□ -1.01
VPS25-203ENST00000589520 HEXAP06865 529 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 TPT1P13693 172 aaKnown RBP8.77□□□□□ -1.01
VPS25-203ENST00000589520 TNFSF4P23510 183 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 UCP1P25874 307 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 CD40P25942 277 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 FAM27E3Q08E93 113 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 HERPUD1Q15011 391 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 PHLDA2Q53GA4 152 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 GPR157Q5UAW9 335 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 EIF5AL1Q6IS14 154 aaKnown RBP8.77□□□□□ -1.01
VPS25-203ENST00000589520 C20orf204Q6ZNR8 217 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 ZNF695Q8IW36 515 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 PDZD9Q8IXQ8 264 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 RPRMLQ8N4K4 120 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 FAM71E2Q8N5Q1 922 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 OR5D13Q8NGL4 314 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 TMEM171Q8WVE6 324 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 SECTM1Q8WVN6 248 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 RND1Q92730 232 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 LURAP1Q96LR2 239 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 ZNF471Q9BX82 626 aaPredicted RBP8.77□□□□□ -1.01
VPS25-203ENST00000589520 SHARPINQ9H0F6 387 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 IL19Q9UHD0 177 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 DUSP13Q9UII6 198 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 NSG2Q9Y328 171 aa8.77□□□□□ -1.01
VPS25-203ENST00000589520 IGKV1-6A0A0C4DH72 117 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms