RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 CCDC90BQ9GZT6 254 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 RACGAP1Q9H0H5 632 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 PPP1R3EQ9H7J1 279 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 S100A14Q9HCY8 104 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 NOX4Q9NPH5 578 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 MSRB1Q9NZV6 116 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 CCDC59Q9P031 241 aaKnown RBP3.91□□□□□ -1.78
ZNF540-204ENST00000586792 TAAR3PQ9P1P4 343 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 GNG12Q9UBI6 72 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 KLHL21Q9UJP4 597 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 FZR1Q9UM11 496 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 UGT2A1Q9Y4X1 527 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 ITPR2Q14571 2701 aa3.91□□□□□ -1.78
ZNF540-204ENST00000586792 IGKV1D-43A0A0B4J1Z2 117 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 KBTBD11-OT1A0A1B0GTJ5 212 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 OR6C6A6NF89 314 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 CENPXA8MT69 81 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 CLDN25C9JDP6 229 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 DLGAP1O14490 977 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 HSBP1O75506 76 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 LY6HO94772 140 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 SOX14O95416 240 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 TXNDC12O95881 172 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 IFNA2P01563 188 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 MMP7P09237 267 aaPredicted RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 PET100P0DJ07 73 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 COX5BP10606 129 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF250P15622 560 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 HIST1H1CP16403 213 aaKnown RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 CD36P16671 472 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF26P17031 533 aaPredicted RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 PMCHP20382 165 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 GPR6P46095 362 aaPredicted RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 OR3A3P47888 321 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 RGS6P49758 472 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 VEGFCP49767 419 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 LCN2P80188 198 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 LOXL1Q08397 574 aaPredicted RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 ECH1Q13011 328 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 MADCAM1Q13477 382 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 ENDOGQ14249 297 aaKnown RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 MAD2L1BPQ15013 274 aaPredicted RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 TMEM249Q2WGJ8 235 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 ELFN2Q5R3F8 820 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 C6orf52Q5T4I8 152 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 DDI2Q5TDH0 399 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 CYB5R2Q6BCY4 276 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 ZFP1Q6P2D0 407 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 RASSF6Q6ZTQ3 369 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 FOXL2NBQ6ZUU3 175 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 TSEN54Q7Z6J9 526 aaKnown RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 CATSPERDQ86XM0 798 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 CENPSQ8N2Z9 138 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 PAQR4Q8N4S7 273 aaPredicted RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 GCSAMQ8N6F7 178 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 THAP8Q8NA92 274 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 OR52N4Q8NGI2 321 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 OR5M8Q8NGP6 311 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 OR6K6Q8NGW6 343 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 OR52I2Q8NH67 350 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 FGFBP3Q8TAT2 258 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 SLC25A40Q8TBP6 338 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 CCDC107Q8WV48 283 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 CANT1Q8WVQ1 401 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 RDH5Q92781 318 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 SPTSSAQ969W0 71 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 MRPL53Q96EL3 112 aaKnown RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 DUS3LQ96G46 650 aaKnown RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 POM121L2Q96KW2 1035 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 C4orf45Q96LM5 186 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF75AQ96N20 296 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 GFI1Q99684 422 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 PITX2Q99697 317 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 DOK1Q99704 481 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 PAPOLGQ9BWT3 736 aaKnown RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 TSSK6Q9BXA6 273 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 HCAR1Q9BXC0 346 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 OR2J1Q9GZK6 312 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 BPESC1Q9GZL8 116 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 ALX4Q9H161 411 aaPredicted RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 HMG20AQ9NP66 347 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 C1orf123Q9NWV4 160 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 RCC2Q9P258 522 aaKnown RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 MYEF2Q9P2K5 600 aaKnown RBP3.9□□□□□ -1.79
ZNF540-204ENST00000586792 CLN8Q9UBY8 286 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 CYB5R1Q9UHQ9 305 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 ENOPH1Q9UHY7 261 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 KCNG2Q9UJ96 466 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 KCNS2Q9ULS6 477 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 POMPQ9Y244 141 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 GMPPBQ9Y5P6 360 aa3.9□□□□□ -1.79
ZNF540-204ENST00000586792 LRBAP50851 2863 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 HRNRQ86YZ3 2850 aaPredicted RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 DCHS2Q6V1P9 2916 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 OTOGQ6ZRI0 2925 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 PRRC2AP48634 2157 aaKnown RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 POLQO75417 2590 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 IGLV3-9A0A075B6K5 115 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 A0A1B0GTI1 187 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 ARRDC5A6NEK1 342 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms