RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 BLOC1S6Q9UL45 172 aa13.44□□□□□ -0.26
USB1-211ENST00000565662 H0YHG0 523 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 AIPO00170 330 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 LDLRAD2Q5SZI1 272 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 GLIPR1L1Q6UWM5 242 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 CCBE1Q6UXH8 406 aaPredicted RBP13.43□□□□□ -0.26
USB1-211ENST00000565662 ZNF497Q6ZNH5 498 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 LINC00311Q8N616 119 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 OR13C5Q8NGS8 318 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 MRGPRDQ8TDS7 321 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 UFD1Q92890 307 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 WNT10AQ9GZT5 417 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 ISYNA1Q9NPH2 558 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 SERTAD4Q9NUC0 356 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 MOB4Q9Y3A3 225 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 LRRC42Q9Y546 428 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 PKD1L1Q8TDX9 2849 aa13.43□□□□□ -0.26
USB1-211ENST00000565662 TRAV8-7A0A075B6U6 113 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 LY6LH3BQJ8 138 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 CCRL2O00421 344 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 FGF16O43320 207 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 BPNT1O95861 308 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 MAS1P04201 325 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 RAB13P51153 203 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 ZNF816Q0VGE8 651 aaPredicted RBP13.42□□□□□ -0.26
USB1-211ENST00000565662 STEAP3Q658P3 488 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 ZFP41Q8N8Y5 198 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 PLPPR1Q8TBJ4 325 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 MUL1Q969V5 352 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 ANKRD60Q9BZ19 345 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 ETAA1Q9NY74 926 aa13.42□□□□□ -0.26
USB1-211ENST00000565662 PNMA8CA0A1B0GUJ8 204 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 CRTAPO75718 401 aaPredicted RBP13.41□□□□□ -0.26
USB1-211ENST00000565662 ARL6IP5O75915 188 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 MGMTP16455 207 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 FUT3P21217 361 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 PAX6P26367 422 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 SSTR5P35346 364 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 OR4X2Q8NGF9 303 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 ARL11Q969Q4 196 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 OCSTAMPQ9BR26 566 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 KCNIP1Q9NZI2 227 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 TRAPPC2LQ9UL33 140 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 PSG11Q9UQ72 335 aa13.41□□□□□ -0.26
USB1-211ENST00000565662 FAM90A9PA6NNJ1 464 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 SDCBPO00560 298 aaPredicted RBP13.4□□□□□ -0.26
USB1-211ENST00000565662 PDCD6O75340 191 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 SC5DO75845 299 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 TSPAN15O95858 294 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 GAPDHP04406 335 aaKnown RBP13.4□□□□□ -0.26
USB1-211ENST00000565662 MYF6P23409 242 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 GDNFP39905 211 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 SLC35A2P78381 396 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 MED22Q15528 200 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 ACSM3Q53FZ2 586 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 HSD17B12Q53GQ0 312 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 RBM48Q5RL73 367 aaKnown RBP13.4□□□□□ -0.26
USB1-211ENST00000565662 RAB12Q6IQ22 244 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 LAIR2Q6ISS4 152 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 GAPTQ8N292 157 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 KCNG3Q8TAE7 436 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 Q96M66 194 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 SIGLEC9Q9Y336 463 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 WNK1Q9H4A3 2382 aa13.4□□□□□ -0.26
USB1-211ENST00000565662 FAM172BPA6NC97 362 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 PTGES3LE9PB15 166 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 HSD17B6O14756 317 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 RGS10O43665 173 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 RGS11O94810 467 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 MT-ND4P03905 459 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 SLC6A1P30531 599 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 PSMD7P51665 324 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 AQP4P55087 323 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 HABP2Q14520 560 aaPredicted RBP13.39□□□□□ -0.27
USB1-211ENST00000565662 UNQ9370/PRO34162Q6UXP9 181 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 IZUMO1Q8IYV9 350 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 OR8H1Q8NGG4 311 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 NEDD4LQ96PU5 975 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 SELENOIQ9C0D9 397 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 GFOD1Q9NXC2 390 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 MGAT4AQ9UM21 535 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 PEX16Q9Y5Y5 336 aa13.39□□□□□ -0.27
USB1-211ENST00000565662 TMEM11P17152 192 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 DEFA6Q01524 100 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 HES1Q14469 280 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 PDLIM3Q53GG5 364 aaPredicted RBP13.38□□□□□ -0.27
USB1-211ENST00000565662 MOB1BQ7L9L4 216 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 PRSS48Q7RTY5 328 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 LYPD6Q86Y78 171 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 COMMD1Q8N668 190 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 OR6M1Q8NGM8 313 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 FAM110DQ8TAY7 271 aaPredicted RBP13.38□□□□□ -0.27
USB1-211ENST00000565662 WIPF2Q8TF74 440 aaPredicted RBP13.38□□□□□ -0.27
USB1-211ENST00000565662 TMEM59Q9BXS4 323 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 GON7Q9BXV9 100 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 RIMS4Q9H426 269 aaPredicted RBP13.38□□□□□ -0.27
USB1-211ENST00000565662 GNG12Q9UBI6 72 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 JPT1Q9UK76 154 aa13.38□□□□□ -0.27
USB1-211ENST00000565662 LSM2Q9Y333 95 aaKnown RBP13.38□□□□□ -0.27
USB1-211ENST00000565662 A0A1W2PPI3 338 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms