RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 COMMD1Q8N668 190 aa13.23□□□□□ -0.29
CCNF-203ENST00000564236 Q8N6K4 173 aa13.23□□□□□ -0.29
CCNF-203ENST00000564236 RFESDQ8TAC1 157 aa13.23□□□□□ -0.29
CCNF-203ENST00000564236 ST6GALNAC6Q969X2 333 aa13.23□□□□□ -0.29
CCNF-203ENST00000564236 ZFP57Q9NU63 452 aa13.23□□□□□ -0.29
CCNF-203ENST00000564236 RCC2Q9P258 522 aaKnown RBP13.23□□□□□ -0.29
CCNF-203ENST00000564236 EXOSC1Q9Y3B2 195 aaKnown RBP13.23□□□□□ -0.29
CCNF-203ENST00000564236 HSD17B6O14756 317 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 GEMIN2O14893 280 aaKnown RBP13.22□□□□□ -0.29
CCNF-203ENST00000564236 LALBAP00709 142 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 CSTBP04080 98 aaKnown RBP13.22□□□□□ -0.29
CCNF-203ENST00000564236 ZNF137PP52743 207 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 RPS11P62280 158 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCNF-203ENST00000564236 RPL23AP62750 156 aaKnown RBP13.22□□□□□ -0.29
CCNF-203ENST00000564236 RIPK1Q13546 671 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 YIF1BQ5BJH7 314 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 ZNF497Q6ZNH5 498 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 CDH26Q8IXH8 852 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 TMEM104Q8NE00 496 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 ZNF555Q8NEP9 628 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 OR10X1Q8NGY0 326 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 MRPS24Q96EL2 167 aaKnown RBP13.22□□□□□ -0.29
CCNF-203ENST00000564236 PGLYRP3Q96LB9 341 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 GPR61Q9BZJ8 451 aa13.22□□□□□ -0.29
CCNF-203ENST00000564236 IGHV1-3A0A0C4DH29 117 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 K7EIL1 84 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 CCRL2O00421 344 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 IGKV1D-33P01593 117 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 IGKV1-33P01594 117 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 IGHV3-7P01780 117 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 GAPDHP04406 335 aaKnown RBP13.21□□□□□ -0.29
CCNF-203ENST00000564236 GTF2F2P13984 249 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 THBS3P49746 956 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 GNG10P50151 68 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 GPR176Q14439 515 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 TMEM30BQ3MIR4 351 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 Q499Y3 187 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 C9orf152Q5JTZ5 239 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 OR2W3Q7Z3T1 314 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 LYPD6Q86Y78 171 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 TGIF2LXQ8IUE1 241 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 MRPL41Q8IXM3 137 aaKnown RBP13.21□□□□□ -0.29
CCNF-203ENST00000564236 OR51D1Q8NGF3 324 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 GHSRQ92847 366 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 ZNF184Q99676 751 aaPredicted RBP13.21□□□□□ -0.29
CCNF-203ENST00000564236 SPACA1Q9HBV2 294 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 C8orf4Q9NR00 106 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 GFOD1Q9NXC2 390 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 ING4Q9UNL4 249 aa13.21□□□□□ -0.29
CCNF-203ENST00000564236 TRBV5-7A0A0A0MS05 114 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 TRAV39A0A0B4J263 110 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 MT-ND4P03905 459 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 MYL12AP19105 171 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 SERPINA2P20848 420 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 KRTAP10-11P60412 298 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 HES1Q14469 280 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 LTC4SQ16873 150 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 ZNF329Q86UD4 541 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 ARL11Q969Q4 196 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 EAF1Q96JC9 268 aaPredicted RBP13.2□□□□□ -0.3
CCNF-203ENST00000564236 NOL4LQ96MY1 436 aaPredicted RBP13.2□□□□□ -0.3
CCNF-203ENST00000564236 P2RX4Q99571 388 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 S100A13Q99584 98 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 ABCG5Q9H222 651 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 LIN7CQ9NUP9 197 aaKnown RBP13.2□□□□□ -0.3
CCNF-203ENST00000564236 CLEC2DQ9UHP7 191 aa13.2□□□□□ -0.3
CCNF-203ENST00000564236 A0A1W2PP11 408 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 FAM90A10PA6NDY2 464 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 FAM90A7PA6NKC0 464 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 SERPINE3A8MV23 424 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 FAM90A23PA8MXZ1 464 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 SC5DO75845 299 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 CD1AP06126 327 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 CD1BP29016 333 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 KHDC1LQ5JSQ8 128 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 TTC23Q5W5X9 447 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 SLC25A48Q6ZT89 311 aaKnown RBP13.19□□□□□ -0.3
CCNF-203ENST00000564236 SLC35E3Q7Z769 313 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 FOXRED2Q8IWF2 684 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 STPG2Q8N412 459 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 PACRGLQ8N7B6 248 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 RNF152Q8N8N0 203 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 ZNF439Q8NDP4 499 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 OR13C5Q8NGS8 318 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 RTN4IP1Q8WWV3 396 aaPredicted RBP13.19□□□□□ -0.3
CCNF-203ENST00000564236 TMEM80Q96HE8 168 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 PLSCR3Q9NRY6 295 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 CKLFQ9UBR5 152 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 ZNF580Q9UK33 172 aa13.19□□□□□ -0.3
CCNF-203ENST00000564236 TRAV8-7A0A075B6U6 113 aa13.18□□□□□ -0.3
CCNF-203ENST00000564236 A0A1W2PPE3 182 aa13.18□□□□□ -0.3
CCNF-203ENST00000564236 MAGEA13PA6NCF6 341 aa13.18□□□□□ -0.3
CCNF-203ENST00000564236 SDCBPO00560 298 aaPredicted RBP13.18□□□□□ -0.3
CCNF-203ENST00000564236 TXNL1O43396 289 aa13.18□□□□□ -0.3
CCNF-203ENST00000564236 CA11O75493 328 aa13.18□□□□□ -0.3
CCNF-203ENST00000564236 MPIG6BO95866 241 aa13.18□□□□□ -0.3
CCNF-203ENST00000564236 GLAP06280 429 aa13.18□□□□□ -0.3
CCNF-203ENST00000564236 MYCNOSP40205 109 aa13.18□□□□□ -0.3
CCNF-203ENST00000564236 TAS2R43P59537 309 aa13.18□□□□□ -0.3
CCNF-203ENST00000564236 SLC35B1P78383 322 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms