RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 RPEQ96AT9 228 aa10.56□□□□□ -0.72
HNRNPC-205ENST00000553300 CST11Q9H112 138 aa10.56□□□□□ -0.72
HNRNPC-205ENST00000553300 DUSP21Q9H596 190 aa10.56□□□□□ -0.72
HNRNPC-205ENST00000553300 RCC2Q9P258 522 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-205ENST00000553300 LSM2Q9Y333 95 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-205ENST00000553300 SIGLEC9Q9Y336 463 aa10.56□□□□□ -0.72
HNRNPC-205ENST00000553300 A0A1W2PP11 408 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 CSF1P09603 554 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 FAM106CPP0CH98 169 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 RAB7AP51149 207 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 MADCAM1Q13477 382 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 IRF3Q14653 427 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 TRAM1Q15629 374 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 TMEM30BQ3MIR4 351 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 Q3ZCU0 254 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 GLT8D1Q68CQ7 371 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 ZNF497Q6ZNH5 498 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 THNSL2Q86YJ6 484 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 RFESDQ8TAC1 157 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 UFD1Q92890 307 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 OR5M11Q96RB7 305 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 ISYNA1Q9NPH2 558 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 SERTAD4Q9NUC0 356 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 PSG11Q9UQ72 335 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 NOTCH1P46531 2555 aa10.55□□□□□ -0.72
HNRNPC-205ENST00000553300 M0QZK8 103 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 RGS10O43665 173 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 CRTAPO75718 401 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 OR2F2O95006 317 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 MT-ND4P03905 459 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 VSIG10L2P0DP72 767 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 MGMTP16455 207 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 JUNBP17275 347 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 SRMP19623 302 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 FUT3P21217 361 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 SSTR5P35346 364 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 RANBP1P43487 201 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 HSD17B12Q53GQ0 312 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 ARSJQ5FYB0 599 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 RAB12Q6IQ22 244 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 TRAT1Q6PIZ9 186 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 GAPTQ8N292 157 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 C8orf31Q8N9H6 132 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 OR10X1Q8NGY0 326 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 TOMM40LQ969M1 308 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 ARL11Q969Q4 196 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 RBM14Q96PK6 669 aaKnown RBP10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 TMED9Q9BVK6 235 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 SELENOIQ9C0D9 397 aa10.54□□□□□ -0.72
HNRNPC-205ENST00000553300 C15orf65H3BRN8 121 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 AIPO00170 330 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 SC5DO75845 299 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 CRHBPP24387 322 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 PSMA1P25786 263 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 VDAC2P45880 294 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 BLCAPP62952 87 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 EMX1Q04741 257 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 TPBGQ13641 420 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 C6orf183Q5T699 404 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 PRSS48Q7RTY5 328 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 CEACAM19Q7Z692 300 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 ZNF554Q86TJ5 538 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 OR8H3Q8N146 312 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 Q96M66 194 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 SLC25A33Q9BSK2 321 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 WNT10AQ9GZT5 417 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 ETAA1Q9NY74 926 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 ZNF581Q9P0T4 197 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 TRAPPC2LQ9UL33 140 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 BLOC1S6Q9UL45 172 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 PEX16Q9Y5Y5 336 aa10.53□□□□□ -0.72
HNRNPC-205ENST00000553300 ERICH4A6NGS2 130 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 FAM90A9PA6NNJ1 464 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 SDCBPO00560 298 aaPredicted RBP10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 SPINT2O43291 252 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 UCHL1P09936 223 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 CD37P11049 281 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 CD24P25063 80 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 HABP2Q14520 560 aaPredicted RBP10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 LTC4SQ16873 150 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 RBM48Q5RL73 367 aaKnown RBP10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 C1orf100Q5SVJ3 147 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 SYT6Q5T7P8 510 aaPredicted RBP10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 LIPKQ5VXJ0 399 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 LRRTM1Q86UE6 522 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 LINC00311Q8N616 119 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 TMEM104Q8NE00 496 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 KCNG3Q8TAE7 436 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 CCDC107Q8WV48 283 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 OCSTAMPQ9BR26 566 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 BANF2Q9H503 90 aa10.52□□□□□ -0.72
HNRNPC-205ENST00000553300 TRAV39A0A0B4J263 110 aa10.52□□□□□ -0.73
HNRNPC-205ENST00000553300 PDCD6O75340 191 aa10.52□□□□□ -0.73
HNRNPC-205ENST00000553300 FBXO24O75426 580 aa10.52□□□□□ -0.73
HNRNPC-205ENST00000553300 ARL6IP5O75915 188 aa10.52□□□□□ -0.73
HNRNPC-205ENST00000553300 GAPDHP04406 335 aaKnown RBP10.52□□□□□ -0.73
HNRNPC-205ENST00000553300 HSMCR30P0CW71 290 aa10.52□□□□□ -0.73
HNRNPC-205ENST00000553300 IL3RAP26951 378 aa10.52□□□□□ -0.73
HNRNPC-205ENST00000553300 GNG10P50151 68 aa10.52□□□□□ -0.73
HNRNPC-205ENST00000553300 GP2P55259 537 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms